STRINGSTRING
ARF6 ARF6 MICALL2 MICALL2 WASHC1 WASHC1 HGS HGS UBE2O UBE2O RILP RILP DENND1A DENND1A LOC102345670 LOC102345670 LOC102348662 LOC102348662 AP5M1 AP5M1 ARHGAP1 ARHGAP1 LOC102349333 LOC102349333 RAB35 RAB35 EHD2 EHD2 EPS15L1 EPS15L1 EHD1 EHD1 SNX6 SNX6 RAB9B RAB9B RAB8A RAB8A ENTR1 ENTR1 EHD4 EHD4 VTI1B VTI1B RAB11FIP3 RAB11FIP3 LOC102353772 LOC102353772 GPX2 GPX2 RAB11B RAB11B SNX9 SNX9 DPY30 DPY30 LOC102363089 LOC102363089 TRAPPC10 TRAPPC10 SNX8 SNX8 SNF8 SNF8 BLOC1S1 BLOC1S1 VPS54 VPS54 MVB12A MVB12A LOC102365663 LOC102365663 SNX1 SNX1 GBF1 GBF1 VPS29 VPS29 RAB7A RAB7A TMEM50A TMEM50A SNX3 SNX3 CHMP6 CHMP6 H3B7E6_LATCH H3B7E6_LATCH BLOC1S2 BLOC1S2 STX6 STX6 SORT1 SORT1 CHMP7 CHMP7 CHMP1A CHMP1A DENND10 DENND10 SNX30 SNX30 HEATR5B HEATR5B CHMP2B CHMP2B TMEM50B TMEM50B PHETA1 PHETA1 H3B2K8_LATCH H3B2K8_LATCH RAB7B RAB7B YKT6 YKT6 STX10 STX10 RAB41 RAB41 LOC102365926 LOC102365926 PIKFYVE PIKFYVE WASHC4 WASHC4 VPS4B VPS4B CLN5 CLN5 GRIP1 GRIP1 PTPN23 PTPN23 REPS1 REPS1 LRRC1 LRRC1 H2ZTQ8_LATCH H2ZTQ8_LATCH RAB11FIP4 RAB11FIP4 EPS15 EPS15 AP5B1 AP5B1 ATP6AP1 ATP6AP1 LOC102357296 LOC102357296 UBXN6 UBXN6 BTBD8 BTBD8 VPS50 VPS50 ARFRP1 ARFRP1 SNX2 SNX2 SNX27 SNX27 GRIPAP1 GRIPAP1 H2ZYW4_LATCH H2ZYW4_LATCH TBC1D23 TBC1D23 STX5 STX5 VPS26B VPS26B RAB29 RAB29 EIPR1 EIPR1 TBC1D10A TBC1D10A LEPROTL1 LEPROTL1 SRL SRL GGA3 GGA3 CHMP1B CHMP1B BET1L BET1L LYST LYST GRIP2 GRIP2 VTA1 VTA1 SNX17 SNX17 EHD3 EHD3 H3A4V3_LATCH H3A4V3_LATCH LOC102367449 LOC102367449 CCDC22 CCDC22 CHMP4A CHMP4A LOC102357408 LOC102357408 CHMP5 CHMP5 AP5S1 AP5S1 CHMP2A CHMP2A RAB6A RAB6A EPG5 EPG5 RHOBTB3 RHOBTB3 CHMP4B CHMP4B H3A8V1_LATCH H3A8V1_LATCH ANKRD63 ANKRD63 VPS36 VPS36 SLC66A2 SLC66A2 LEPROT LEPROT AP5Z1 AP5Z1 RAB10 RAB10 VPS39 VPS39 ANKRD50 ANKRD50 LOC102355780 LOC102355780 GCC2 GCC2 HEATR5A HEATR5A TBC1D5 TBC1D5 VPS51 VPS51 TBC1D10C TBC1D10C H3B1A0_LATCH H3B1A0_LATCH H3B144_LATCH H3B144_LATCH VPS28 VPS28 TRARG1 TRARG1 CMTM6 CMTM6 RGP1 RGP1 H3AXK0_LATCH H3AXK0_LATCH VPS35L VPS35L VPS52 VPS52 STAM STAM VCP VCP RAB8B RAB8B RAB11A RAB11A RASSF9 RASSF9 SNX5 SNX5 SNX32 SNX32 VTI1A VTI1A ITSN2 ITSN2 LOC102357106 LOC102357106 VPS26C VPS26C ZFYVE9 ZFYVE9 RAB14 RAB14 GOLT1B GOLT1B STX16 STX16 ALS2 ALS2 VAMP3 VAMP3 LOC102358523 LOC102358523 LOC102361373 LOC102361373 AP3D1 AP3D1 SNX7 SNX7 DENND1B DENND1B VPS53 VPS53 CLEC16A CLEC16A CALY CALY PREPL PREPL SNX12 SNX12 ITSN1 ITSN1 H3ANE5_LATCH H3ANE5_LATCH RNF126 RNF126 H3AN78_LATCH H3AN78_LATCH CLTC CLTC VPS35 VPS35 ANKRD27 ANKRD27 H3ALU1_LATCH H3ALU1_LATCH ARL1 ARL1 RBSN RBSN H3AL78_LATCH H3AL78_LATCH CLTCL1 CLTCL1 ZFYVE16 ZFYVE16 H3AKJ7_LATCH H3AKJ7_LATCH SNX18 SNX18 PLEKHJ1 PLEKHJ1 VPS4A VPS4A LOC102352152 LOC102352152 H3AJ45_LATCH H3AJ45_LATCH TMEM87B TMEM87B TBC1D10B TBC1D10B CHMP4C CHMP4C RAB13 RAB13 LOC102357473 LOC102357473 SNX4 SNX4 RIC1 RIC1 TMEM87A TMEM87A H3AFQ9_LATCH H3AFQ9_LATCH VPS26A VPS26A DCTN1 DCTN1 RAB6B RAB6B ANKFY1 ANKFY1 LAPTM4B LAPTM4B VPS16 VPS16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
MICALL2Uncharacterized protein. (800 aa)
WASHC1WASH complex subunit 1. (474 aa)
HGSHepatocyte growth factor-regulated tyrosine kinase substrate. (480 aa)
UBE2OUbiquitin conjugating enzyme E2 O. (1313 aa)
RILPRab interacting lysosomal protein. (423 aa)
DENND1ADENN domain containing 1A. (1001 aa)
LOC102345670Sortilin. (809 aa)
LOC102348662Uncharacterized protein. (199 aa)
AP5M1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (510 aa)
ARHGAP1Rho GTPase activating protein 1. (318 aa)
LOC102349333Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (176 aa)
RAB35RAB35, member RAS oncogene family. (203 aa)
EHD2EH-domain containing 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (482 aa)
EPS15L1Epidermal growth factor receptor pathway substrate 15 like 1. (916 aa)
EHD1EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (536 aa)
SNX6Sorting nexin; Involved in several stages of intracellular trafficking. (423 aa)
RAB9BRAB9B, member RAS oncogene family. (213 aa)
RAB8ARAB8A, member RAS oncogene family. (598 aa)
ENTR1Endosome associated trafficking regulator 1. (355 aa)
EHD4EH domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (591 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (235 aa)
RAB11FIP3RAB11 family interacting protein 3. (497 aa)
LOC102353772Si:dkey-98f17.5. (455 aa)
GPX2Glutathione peroxidase 2. (307 aa)
RAB11BRAB11B, member RAS oncogene family. (172 aa)
SNX9Sorting nexin 9. (467 aa)
DPY30Dpy-30 histone methyltransferase complex regulatory subunit. (101 aa)
LOC102363089RAB11B, member RAS oncogene family, b. (228 aa)
TRAPPC10Trafficking protein particle complex 10. (1258 aa)
SNX8Sorting nexin 8. (571 aa)
SNF8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
BLOC1S1Biogenesis of lysosomal organelles complex-1, subunit 1. (125 aa)
VPS54VPS54 subunit of GARP complex. (980 aa)
MVB12AMultivesicular body subunit 12A. (273 aa)
LOC102365663Zgc:136908; Belongs to the AAA ATPase family. (697 aa)
SNX1PX domain-containing protein. (510 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1912 aa)
VPS29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (204 aa)
RAB7ARAB7A, member RAS oncogene family. (207 aa)
TMEM50ATransmembrane protein 50A. (159 aa)
SNX3Sorting nexin 3. (108 aa)
CHMP6Charged multivesicular body protein 6. (146 aa)
H3B7E6_LATCHUncharacterized protein. (237 aa)
BLOC1S2Biogenesis of lysosomal organelles complex 1 subunit 2. (185 aa)
STX6Syntaxin 6; Belongs to the syntaxin family. (265 aa)
SORT1Sortilin. (734 aa)
CHMP7Charged multivesicular body protein 7. (453 aa)
CHMP1ACharged multivesicular body protein 1A. (206 aa)
DENND10DENN domain containing 10. (352 aa)
SNX30Sorting nexin family member 30. (513 aa)
HEATR5BHEAT repeat containing 5B. (2054 aa)
CHMP2BCharged multivesicular body protein 2B. (214 aa)
TMEM50BTransmembrane protein 50B. (158 aa)
PHETA1Si:ch211-193c2.2. (282 aa)
H3B2K8_LATCHUncharacterized protein. (159 aa)
RAB7BRAB7B, member RAS oncogene family. (201 aa)
YKT6YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (199 aa)
STX10Syntaxin 10. (252 aa)
RAB41RAB41, member RAS oncogene family. (211 aa)
LOC102365926Si:dkey-246g23.2. (244 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (2113 aa)
WASHC4WASH complex subunit 4. (940 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (448 aa)
CLN5CLN5 intracellular trafficking protein. (297 aa)
GRIP1Glutamate receptor interacting protein 1. (938 aa)
PTPN23Protein tyrosine phosphatase non-receptor type 23. (1414 aa)
REPS1RALBP1 associated Eps domain containing 1. (326 aa)
LRRC1Uncharacterized protein. (155 aa)
H2ZTQ8_LATCHUncharacterized protein. (878 aa)
RAB11FIP4RAB11 family interacting protein 4. (530 aa)
EPS15Epidermal growth factor receptor pathway substrate 15. (455 aa)
AP5B1Adaptor related protein complex 5 subunit beta 1. (928 aa)
ATP6AP1ATPase H+ transporting accessory protein 1. (474 aa)
LOC102357296FPL domain-containing protein. (365 aa)
UBXN6UBX domain protein 6. (439 aa)
BTBD8BTB domain containing 8. (1400 aa)
VPS50VPS50 subunit of EARP/GARPII complex. (964 aa)
ARFRP1ADP ribosylation factor related protein 1. (121 aa)
SNX2Sorting nexin 2. (520 aa)
SNX27Sorting nexin 27. (559 aa)
GRIPAP1GRIP1 associated protein 1. (826 aa)
H2ZYW4_LATCHANK_REP_REGION domain-containing protein. (149 aa)
TBC1D23TBC1 domain family member 23. (684 aa)
STX5Syntaxin 5; Belongs to the syntaxin family. (350 aa)
VPS26BVPS26, retromer complex component B. (194 aa)
RAB29RAB29, member RAS oncogene family. (206 aa)
EIPR1EARP complex and GARP complex interacting protein 1. (387 aa)
TBC1D10ARab-GAP TBC domain-containing protein. (345 aa)
LEPROTL1Leptin receptor overlapping transcript like 1. (131 aa)
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (483 aa)
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (736 aa)
CHMP1BCharged multivesicular body protein 1B. (161 aa)
BET1LBet1 golgi vesicular membrane trafficking protein like. (112 aa)
LYSTLysosomal trafficking regulator. (3705 aa)
GRIP2Glutamate receptor interacting protein 2. (1064 aa)
VTA1Vta1 domain-containing protein. (43 aa)
SNX17Sorting nexin 17. (455 aa)
EHD3EH domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
H3A4V3_LATCHALMS_motif domain-containing protein. (315 aa)
LOC102367449Zgc:162698. (590 aa)
CCDC22Coiled-coil domain containing 22. (647 aa)
CHMP4ACharged multivesicular body protein 4A. (221 aa)
LOC102357408Uncharacterized protein. (449 aa)
CHMP5Charged multivesicular body protein 5. (220 aa)
AP5S1Adaptor related protein complex 5 subunit sigma 1. (202 aa)
CHMP2ACharged multivesicular body protein 2A. (295 aa)
RAB6ARAB6A, member RAS oncogene family. (210 aa)
EPG5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (1395 aa)
RHOBTB3Rho related BTB domain containing 3. (608 aa)
CHMP4BCharged multivesicular body protein 4B. (225 aa)
H3A8V1_LATCHUncharacterized protein. (208 aa)
ANKRD63ANK_REP_REGION domain-containing protein. (509 aa)
VPS36Vacuolar protein sorting 36 homolog. (261 aa)
SLC66A2Solute carrier family 66 member 2. (270 aa)
LEPROTLeptin receptor overlapping transcript. (131 aa)
AP5Z1Adaptor related protein complex 5 subunit zeta 1. (809 aa)
RAB10RAB10, member RAS oncogene family. (201 aa)
VPS39VPS39 subunit of HOPS complex. (875 aa)
ANKRD50Ankyrin repeat domain 50. (1418 aa)
LOC102355780Si:ch211-11k18.4. (451 aa)
GCC2GRIP and coiled-coil domain containing 2. (1695 aa)
HEATR5AHEAT repeat containing 5A. (2048 aa)
TBC1D5TBC1 domain family member 5. (335 aa)
VPS51VPS51 subunit of GARP complex. (756 aa)
TBC1D10CRab-GAP TBC domain-containing protein. (518 aa)
H3B1A0_LATCHVPS9 domain-containing protein. (938 aa)
H3B144_LATCHUncharacterized protein. (589 aa)
VPS28VPS28 subunit of ESCRT-I; Belongs to the VPS28 family. (180 aa)
TRARG1Trafficking regulator of GLUT4 (SLC2A4) 1. (181 aa)
CMTM6CKLF like MARVEL transmembrane domain containing 6. (186 aa)
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (340 aa)
H3AXK0_LATCHUncharacterized protein. (161 aa)
VPS35LVPS35 endosomal protein sorting factor like. (840 aa)
VPS52VPS52 subunit of GARP complex. (528 aa)
STAMSignal transducing adaptor molecule. (537 aa)
VCPValosin containing protein. (801 aa)
RAB8BRAB8B, member RAS oncogene family. (206 aa)
RAB11ARAB11A, member RAS oncogene family. (215 aa)
RASSF9Ras association domain family member 9. (428 aa)
SNX5Sorting nexin 5. (386 aa)
SNX32Sorting nexin 32. (412 aa)
VTI1AVesicle transport through interaction with t-SNAREs 1A. (214 aa)
ITSN2Intersectin 2. (1704 aa)
LOC102357106RAB11a, member RAS oncogene family, like. (217 aa)
VPS26CVPS26 endosomal protein sorting factor C. (295 aa)
ZFYVE9Zinc finger FYVE domain-containing protein. (1429 aa)
RAB14RAB14, member RAS oncogene family. (234 aa)
GOLT1BGolgi transport 1B. (138 aa)
STX16Syntaxin 16; Belongs to the syntaxin family. (309 aa)
ALS2Alsin Rho guanine nucleotide exchange factor ALS2. (1678 aa)
VAMP3Vesicle associated membrane protein 3. (138 aa)
LOC102358523Uncharacterized protein. (424 aa)
LOC102361373BAR_3_WASP_bdg domain-containing protein. (115 aa)
AP3D1Adaptor related protein complex 3 subunit delta 1. (1263 aa)
SNX7Sorting nexin 7. (426 aa)
DENND1BUDENN domain-containing protein. (268 aa)
VPS53VPS53 subunit of GARP complex. (831 aa)
CLEC16AC-type lectin domain containing 16A. (610 aa)
CALYCalcyon neuron specific vesicular protein. (187 aa)
PREPLProlyl endopeptidase like. (663 aa)
SNX12Sorting nexin 12. (174 aa)
ITSN1Intersectin 1 (SH3 domain protein). (1175 aa)
H3ANE5_LATCHBRO1 domain-containing protein. (170 aa)
RNF126Ring finger protein 126. (313 aa)
H3AN78_LATCHAnkyrin repeat domain 50-like. (1410 aa)
CLTCClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
VPS35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (790 aa)
ANKRD27Ankyrin repeat domain 27. (888 aa)
H3ALU1_LATCHUncharacterized protein. (1358 aa)
ARL1ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family. (171 aa)
RBSNRabenosyn, RAB effector. (810 aa)
H3AL78_LATCHCAP-ZIP_m domain-containing protein. (1324 aa)
CLTCL1Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
ZFYVE16Zinc finger FYVE domain-containing protein. (1493 aa)
H3AKJ7_LATCHDENN/MADD domain containing 1B. (493 aa)
SNX18Sorting nexin. (587 aa)
PLEKHJ1Pleckstrin homology domain containing J1. (147 aa)
VPS4AVacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (437 aa)
LOC102352152Uncharacterized protein. (206 aa)
H3AJ45_LATCHUncharacterized protein. (651 aa)
TMEM87BTransmembrane protein 87B. (401 aa)
TBC1D10BTBC1 domain family member 10B. (633 aa)
CHMP4CUncharacterized protein. (240 aa)
RAB13Uncharacterized protein. (178 aa)
LOC102357473Zgc:153733. (283 aa)
SNX4Sorting nexin 4. (405 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1414 aa)
TMEM87ATransmembrane protein 87A. (508 aa)
H3AFQ9_LATCHUncharacterized protein. (481 aa)
VPS26AVPS26, retromer complex component A. (326 aa)
DCTN1Dynactin 1a. (1139 aa)
RAB6BUncharacterized protein. (186 aa)
ANKFY1Ankyrin repeat and FYVE domain containing 1. (1054 aa)
LAPTM4BLysosomal protein transmembrane 4 beta. (117 aa)
VPS16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (823 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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