STRINGSTRING
PCSK9 PCSK9 SNTA1 SNTA1 SCN3B SCN3B SCLT1 SCLT1 NEDD4 NEDD4 FGF14 FGF14 FGF12 FGF12 COMMD1 COMMD1 SCN4B SCN4B SCN2B SCN2B GPLD1 GPLD1 H2ZY86_LATCH H2ZY86_LATCH NEDD4L NEDD4L PTPN3 PTPN3 SCN1B SCN1B RANGRF RANGRF FGF11 FGF11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCSK9Proprotein convertase subtilisin/kexin type 9. (672 aa)
SNTA1Syntrophin alpha 1. (481 aa)
SCN3BSodium voltage-gated channel beta subunit 3. (216 aa)
SCLT1Sodium channel and clathrin linker 1. (698 aa)
NEDD4NEDD4 E3 ubiquitin protein ligase. (1313 aa)
FGF14Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)
FGF12Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (243 aa)
COMMD1Copper metabolism domain containing 1. (188 aa)
SCN4BSodium voltage-gated channel beta subunit 4. (210 aa)
SCN2BSodium voltage-gated channel beta subunit 2. (215 aa)
GPLD1Glycosylphosphatidylinositol specific phospholipase D1. (835 aa)
H2ZY86_LATCHPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (177 aa)
NEDD4LE3 ubiquitin-protein ligase. (876 aa)
PTPN3Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (871 aa)
SCN1BSodium voltage-gated channel beta subunit 1. (221 aa)
RANGRFUncharacterized protein. (203 aa)
FGF11Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (246 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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