(38 nodes) Kinesin binding network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2ZRN8_LATCH	Uncharacterized protein. (160 aa)
	TTBK2	Tau tubulin kinase 2. (1233 aa)
	IFT88	Intraflagellar transport 88. (833 aa)
	DCDC2	Doublecortin domain containing 2. (274 aa)
	SPAG9	Sperm associated antigen 9. (1338 aa)
	SYBU	Syntabulin. (679 aa)
	RAB29	RAB29, member RAS oncogene family. (206 aa)
	CLSTN3	Calsyntenin 3. (668 aa)
	JAKMIP1	Janus kinase and microtubule interacting protein 1. (831 aa)
	PLEKHM2	Pleckstrin homology and RUN domain containing M2. (1052 aa)
	ARHGEF10	Rho guanine nucleotide exchange factor 10. (1338 aa)
	H3A393_LATCH	Uncharacterized protein. (1296 aa)
	KIFBP	KIF1 binding protein. (622 aa)
	KIFAP3	Kinesin associated protein 3. (795 aa)
	TOR1B	Torsin. (332 aa)
	CLSTN1	Calsyntenin 1. (942 aa)
	ZFYVE21	Kinesin light chain 1a. (634 aa)
	H3ALV2_LATCH	Doublecortin domain-containing protein. (123 aa)
	CHCHD6	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (246 aa)
	CFDP1	Craniofacial development protein 1; May play a role during embryogenesis. (310 aa)
	MAPK8IP2	Mitogen-activated protein kinase 8 interacting protein 2. (992 aa)
	H3ARD8_LATCH	Uncharacterized protein. (2003 aa)
	KLC4	Kinesin light chain 4. (590 aa)
	MAPK8IP3	Mitogen-activated protein kinase 8 interacting protein 3. (1338 aa)
	ATCAY	ATCAY kinesin light chain interacting caytaxin. (676 aa)
	KTN1	Kinectin 1. (1362 aa)
	DCDC2B	Doublecortin domain containing 2B. (372 aa)
	KLC2	TPR_REGION domain-containing protein. (603 aa)
	H3B340_LATCH	Uncharacterized protein. (619 aa)
	CLSTN2	Uncharacterized protein. (505 aa)
	H3B5L7_LATCH	Uncharacterized protein. (173 aa)
	FAM83D	Family with sequence similarity 83 member D. (587 aa)
	CROCC	Uncharacterized protein. (1191 aa)
	H3B7W1_LATCH	Uncharacterized protein. (42 aa)
	PRC1	Protein regulator of cytokinesis 1. (616 aa)
	AP1AR	Adaptor related protein complex 1 associated regulatory protein. (223 aa)
	FEZ2	Fasciculation and elongation protein zeta 2. (391 aa)
	MAPK8IP1	Mitogen-activated protein kinase 8 interacting protein 1. (704 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLSTN1	H3B340_LATCH	ENSLACP00000009273	ENSLACP00000016311	Calsyntenin 1.	Uncharacterized protein.	0.588
CLSTN1	KLC2	ENSLACP00000009273	ENSLACP00000014081	Calsyntenin 1.	TPR_REGION domain-containing protein.	0.588
CLSTN1	KLC4	ENSLACP00000009273	ENSLACP00000012780	Calsyntenin 1.	Kinesin light chain 4.	0.588
CLSTN1	ZFYVE21	ENSLACP00000009273	ENSLACP00000010192	Calsyntenin 1.	Kinesin light chain 1a.	0.588
CLSTN2	H3B5L7_LATCH	ENSLACP00000016499	ENSLACP00000017188	Uncharacterized protein.	Uncharacterized protein.	0.917
CROCC	H2ZRN8_LATCH	ENSLACP00000017474	ENSLACP00000000059	Uncharacterized protein.	Uncharacterized protein.	0.937
FAM83D	TTBK2	ENSLACP00000017360	ENSLACP00000001293	Family with sequence similarity 83 member D.	Tau tubulin kinase 2.	0.516
H2ZRN8_LATCH	CROCC	ENSLACP00000000059	ENSLACP00000017474	Uncharacterized protein.	Uncharacterized protein.	0.937
H3A393_LATCH	H3B340_LATCH	ENSLACP00000004114	ENSLACP00000016311	Uncharacterized protein.	Uncharacterized protein.	0.552
H3A393_LATCH	KLC2	ENSLACP00000004114	ENSLACP00000014081	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.552
H3A393_LATCH	KLC4	ENSLACP00000004114	ENSLACP00000012780	Uncharacterized protein.	Kinesin light chain 4.	0.552
H3A393_LATCH	MAPK8IP1	ENSLACP00000004114	ENSLACP00000021064	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 1.	0.442
H3A393_LATCH	MAPK8IP2	ENSLACP00000004114	ENSLACP00000011391	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 2.	0.442
H3A393_LATCH	ZFYVE21	ENSLACP00000004114	ENSLACP00000010192	Uncharacterized protein.	Kinesin light chain 1a.	0.552
H3B340_LATCH	CLSTN1	ENSLACP00000016311	ENSLACP00000009273	Uncharacterized protein.	Calsyntenin 1.	0.588
H3B340_LATCH	H3A393_LATCH	ENSLACP00000016311	ENSLACP00000004114	Uncharacterized protein.	Uncharacterized protein.	0.552
H3B340_LATCH	H3B5L7_LATCH	ENSLACP00000016311	ENSLACP00000017188	Uncharacterized protein.	Uncharacterized protein.	0.572
H3B340_LATCH	KIFAP3	ENSLACP00000016311	ENSLACP00000006219	Uncharacterized protein.	Kinesin associated protein 3.	0.670
H3B340_LATCH	KTN1	ENSLACP00000016311	ENSLACP00000021653	Uncharacterized protein.	Kinectin 1.	0.438
H3B340_LATCH	MAPK8IP1	ENSLACP00000016311	ENSLACP00000021064	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 1.	0.497