STRINGSTRING
LOC102345094 LOC102345094 RPS4X RPS4X RPSA RPSA RPS12 RPS12 H3A5G2_LATCH H3A5G2_LATCH RPS3 RPS3 RPS8 RPS8 MRPS11 MRPS11 RPS27A RPS27A RPS7 RPS7 RPS27 RPS27 H3AIG3_LATCH H3AIG3_LATCH EIF2D EIF2D EIF2A EIF2A RPS15 RPS15 LOC102360432 LOC102360432 RPS5 RPS5 RPS3A RPS3A RPS9 RPS9 DHX29 DHX29 RPS26 RPS26 RPS27L RPS27L RPS21 RPS21 RPS2 RPS2 LOC102354416 LOC102354416 RPS25 RPS25 RPS10 RPS10 RPS13 RPS13 H3BBR9_LATCH H3BBR9_LATCH RPS19 RPS19 RPS16 RPS16 RPS23 RPS23 H3B7R6_LATCH H3B7R6_LATCH RPS29 RPS29 RPS14 RPS14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC10234509440S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (313 aa)
RPS1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
H3A5G2_LATCHRibosomal protein S14. (149 aa)
RPS3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (254 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (209 aa)
MRPS11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (198 aa)
RPS27ARibosomal protein S27a. (156 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (198 aa)
RPS2740S ribosomal protein S27. (84 aa)
H3AIG3_LATCH40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (88 aa)
EIF2DEukaryotic translation initiation factor 2D. (596 aa)
EIF2AEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (585 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (151 aa)
LOC102360432Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
RPS5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
RPS9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (139 aa)
DHX29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1368 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
RPS27L40S ribosomal protein S27. (84 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
RPS2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (290 aa)
LOC102354416Uncharacterized protein. (160 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
RPS10Ribosomal protein S10. (176 aa)
RPS13Ribosomal protein S13. (151 aa)
H3BBR9_LATCHRibosomal_S13_N domain-containing protein. (152 aa)
RPS19Ribosomal protein S19. (159 aa)
RPS16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (202 aa)
RPS23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
H3B7R6_LATCHRibosomal_S4e domain-containing protein. (153 aa)
RPS29Ribosomal protein S29. (56 aa)
RPS14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (163 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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