STRINGSTRING
PTPN6 PTPN6 RET RET TGFB2 TGFB2 H3AM01_LATCH H3AM01_LATCH LRRC45 LRRC45 SYK SYK IFT74 IFT74 CIB1 CIB1 LOC102352268 LOC102352268
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTPN6Protein tyrosine phosphatase non-receptor type 6. (338 aa)
RETRet proto-oncogene; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1090 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
H3AM01_LATCHIntegrin beta; Belongs to the integrin beta chain family. (769 aa)
LRRC45Leucine rich repeat containing 45. (679 aa)
SYKTyrosine-protein kinase. (616 aa)
IFT74Intraflagellar transport 74. (234 aa)
CIB1Calcium and integrin binding 1. (190 aa)
LOC102352268Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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