(16 nodes) Pyrimidine nucleoside catabolic process network (Latimeria chalumnae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	H2ZTU8_LATCH	Uncharacterized protein. (60 aa)
	UPP1	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. (313 aa)
	LOC102357966	Si:dkey-4e7.3. (318 aa)
	H3ACR0_LATCH	Uncharacterized protein. (151 aa)
	CDADC1	Cytidine and dCMP deaminase domain containing 1. (485 aa)
	LOC102358410	IU_nuc_hydro domain-containing protein. (328 aa)
	LOC102361891	Zgc:194887. (292 aa)
	AICDA	Activation-induced cytidine deaminase. (149 aa)
	DPYD	Pyr_redox_2 domain-containing protein. (333 aa)
	H3ATP6_LATCH	Fibrinogen C-terminal domain-containing protein. (204 aa)
	H3AUF0_LATCH	Fibrinogen C-terminal domain-containing protein. (239 aa)
	UPB1	Beta-ureidopropionase 1. (390 aa)
	H3B7Z9_LATCH	Uncharacterized protein. (344 aa)
	APOBEC2	Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (230 aa)
	H3BH75_LATCH	Uncharacterized protein. (421 aa)
	CDA	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (145 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AICDA	APOBEC2	ENSLACP00000010577	ENSLACP00000018146	Activation-induced cytidine deaminase.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.467
AICDA	CDA	ENSLACP00000010577	ENSLACP00000022824	Activation-induced cytidine deaminase.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.605
AICDA	H2ZTU8_LATCH	ENSLACP00000010577	ENSLACP00000000819	Activation-induced cytidine deaminase.	Uncharacterized protein.	0.478
APOBEC2	AICDA	ENSLACP00000018146	ENSLACP00000010577	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	Activation-induced cytidine deaminase.	0.467
APOBEC2	CDA	ENSLACP00000018146	ENSLACP00000022824	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.476
APOBEC2	H3B7Z9_LATCH	ENSLACP00000018146	ENSLACP00000018020	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	Uncharacterized protein.	0.477
CDA	AICDA	ENSLACP00000022824	ENSLACP00000010577	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Activation-induced cytidine deaminase.	0.605
CDA	APOBEC2	ENSLACP00000022824	ENSLACP00000018146	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.476
CDA	CDADC1	ENSLACP00000022824	ENSLACP00000008634	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Cytidine and dCMP deaminase domain containing 1.	0.509
CDA	DPYD	ENSLACP00000022824	ENSLACP00000012665	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Pyr_redox_2 domain-containing protein.	0.642
CDA	H3ACR0_LATCH	ENSLACP00000022824	ENSLACP00000007431	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Uncharacterized protein.	0.642
CDA	LOC102357966	ENSLACP00000022824	ENSLACP00000006523	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Si:dkey-4e7.3.	0.935
CDA	LOC102358410	ENSLACP00000022824	ENSLACP00000009497	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	IU_nuc_hydro domain-containing protein.	0.935
CDA	UPB1	ENSLACP00000022824	ENSLACP00000017361	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Beta-ureidopropionase 1.	0.515
CDA	UPP1	ENSLACP00000022824	ENSLACP00000003085	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.	0.999
CDADC1	CDA	ENSLACP00000008634	ENSLACP00000022824	Cytidine and dCMP deaminase domain containing 1.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.509
CDADC1	UPP1	ENSLACP00000008634	ENSLACP00000003085	Cytidine and dCMP deaminase domain containing 1.	Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.	0.809
DPYD	CDA	ENSLACP00000012665	ENSLACP00000022824	Pyr_redox_2 domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.642
DPYD	H3ACR0_LATCH	ENSLACP00000012665	ENSLACP00000007431	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.922
DPYD	UPB1	ENSLACP00000012665	ENSLACP00000017361	Pyr_redox_2 domain-containing protein.	Beta-ureidopropionase 1.	0.631