(21 nodes) Negative regulation of receptor-mediated endocytosis network (Latimeria chalumnae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	LOC102346019	C1q domain-containing protein. (226 aa)
	ANKRD13B	Ankyrin repeat domain 13B. (591 aa)
	C1QTNF9	C1q domain-containing protein. (198 aa)
	LRRTM2	Leucine rich repeat transmembrane neuronal 2. (522 aa)
	NEU2	Neuraminidase 2. (381 aa)
	ANKRD13D	Ankyrin repeat domain 13D. (611 aa)
	ATXN2	Ataxin 2. (1085 aa)
	LRRTM1	Leucine rich repeat transmembrane neuronal 1. (521 aa)
	PCSK9	Proprotein convertase subtilisin/kexin type 9. (672 aa)
	UNC119	Unc-119 lipid binding chaperone. (257 aa)
	H3AM01_LATCH	Integrin beta; Belongs to the integrin beta chain family. (769 aa)
	LOC102346105	ANK_REP_REGION domain-containing protein. (133 aa)
	WDR54	WD repeat domain 54. (193 aa)
	ITGAV	Integrin_alpha2 domain-containing protein. (597 aa)
	ADIPOQ	Adiponectin, C1Q and collagen domain containing. (259 aa)
	NEU3	Neuraminidase 3. (339 aa)
	H3A6Z2_LATCH	GMP_PDE_delta domain-containing protein. (185 aa)
	ANKRD13A	Ankyrin repeat domain 13A. (469 aa)
	RIN3	Ras and Rab interactor 3. (951 aa)
	RABGEF1	RAB guanine nucleotide exchange factor (GEF) 1. (532 aa)
	LOC102354752	VPS9 domain-containing protein. (197 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADIPOQ	LOC102346019	ENSLACP00000000452	ENSLACP00000019134	Adiponectin, C1Q and collagen domain containing.	C1q domain-containing protein.	0.904
ANKRD13A	LOC102346105	ENSLACP00000007434	ENSLACP00000023509	Ankyrin repeat domain 13A.	ANK_REP_REGION domain-containing protein.	0.900
H3AM01_LATCH	ITGAV	ENSLACP00000010672	ENSLACP00000000513	Integrin beta; Belongs to the integrin beta chain family.	Integrin_alpha2 domain-containing protein.	0.998
ITGAV	H3AM01_LATCH	ENSLACP00000000513	ENSLACP00000010672	Integrin_alpha2 domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.998
LOC102346019	ADIPOQ	ENSLACP00000019134	ENSLACP00000000452	C1q domain-containing protein.	Adiponectin, C1Q and collagen domain containing.	0.904
LOC102346105	ANKRD13A	ENSLACP00000023509	ENSLACP00000007434	ANK_REP_REGION domain-containing protein.	Ankyrin repeat domain 13A.	0.900
LOC102354752	RABGEF1	ENSLACP00000020287	ENSLACP00000021436	VPS9 domain-containing protein.	RAB guanine nucleotide exchange factor (GEF) 1.	0.648
LOC102354752	RIN3	ENSLACP00000020287	ENSLACP00000021678	VPS9 domain-containing protein.	Ras and Rab interactor 3.	0.701
NEU2	NEU3	ENSLACP00000014462	ENSLACP00000005255	Neuraminidase 2.	Neuraminidase 3.	0.905
NEU3	NEU2	ENSLACP00000005255	ENSLACP00000014462	Neuraminidase 3.	Neuraminidase 2.	0.905
RABGEF1	LOC102354752	ENSLACP00000021436	ENSLACP00000020287	RAB guanine nucleotide exchange factor (GEF) 1.	VPS9 domain-containing protein.	0.648
RABGEF1	RIN3	ENSLACP00000021436	ENSLACP00000021678	RAB guanine nucleotide exchange factor (GEF) 1.	Ras and Rab interactor 3.	0.701
RIN3	LOC102354752	ENSLACP00000021678	ENSLACP00000020287	Ras and Rab interactor 3.	VPS9 domain-containing protein.	0.701
RIN3	RABGEF1	ENSLACP00000021678	ENSLACP00000021436	Ras and Rab interactor 3.	RAB guanine nucleotide exchange factor (GEF) 1.	0.701