(14 nodes) Clathrin coat assembly network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102347431	Si:ch211-200p22.4. (504 aa)
	HIP1R	Huntingtin interacting protein 1 related. (1039 aa)
	HIP1	Huntingtin interacting protein 1. (1004 aa)
	DAB2	DAB adaptor protein 2. (745 aa)
	H3B7R9_LATCH	Uncharacterized protein. (174 aa)
	PICALM	Phosphatidylinositol binding clathrin assembly protein. (664 aa)
	SGIP1	SH3 domain GRB2 like endophilin interacting protein 1; Belongs to the adaptor complexes medium subunit family. (644 aa)
	CLTCL1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
	FCHO2	FCH domain only 2. (853 aa)
	CLTC	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
	CALY	Calcyon neuron specific vesicular protein. (187 aa)
	FCHO1	FCH domain only 1. (905 aa)
	H3B853_LATCH	Uncharacterized protein. (433 aa)
	H3BE69_LATCH	PID domain-containing protein. (136 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLTC	DAB2	ENSLACP00000011035	ENSLACP00000014800	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	DAB adaptor protein 2.	0.603
CLTC	FCHO1	ENSLACP00000011035	ENSLACP00000013581	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	FCH domain only 1.	0.628
CLTC	FCHO2	ENSLACP00000011035	ENSLACP00000011029	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	FCH domain only 2.	0.628
CLTC	H3B7R9_LATCH	ENSLACP00000011035	ENSLACP00000017940	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.692
CLTC	H3B853_LATCH	ENSLACP00000011035	ENSLACP00000018074	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.692
CLTC	H3BE69_LATCH	ENSLACP00000011035	ENSLACP00000020190	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	PID domain-containing protein.	0.603
CLTC	HIP1	ENSLACP00000011035	ENSLACP00000021547	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1.	0.860
CLTC	HIP1R	ENSLACP00000011035	ENSLACP00000020325	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1 related.	0.860
CLTC	LOC102347431	ENSLACP00000011035	ENSLACP00000018456	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Si:ch211-200p22.4.	0.691
CLTC	PICALM	ENSLACP00000011035	ENSLACP00000016446	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Phosphatidylinositol binding clathrin assembly protein.	0.692
CLTC	SGIP1	ENSLACP00000011035	ENSLACP00000014967	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	SH3 domain GRB2 like endophilin interacting protein 1; Belongs to the adaptor complexes medium subunit family.	0.626
CLTCL1	DAB2	ENSLACP00000010273	ENSLACP00000014800	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	DAB adaptor protein 2.	0.603
CLTCL1	FCHO1	ENSLACP00000010273	ENSLACP00000013581	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	FCH domain only 1.	0.628
CLTCL1	FCHO2	ENSLACP00000010273	ENSLACP00000011029	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	FCH domain only 2.	0.628
CLTCL1	H3B7R9_LATCH	ENSLACP00000010273	ENSLACP00000017940	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.692
CLTCL1	H3B853_LATCH	ENSLACP00000010273	ENSLACP00000018074	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.692
CLTCL1	H3BE69_LATCH	ENSLACP00000010273	ENSLACP00000020190	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	PID domain-containing protein.	0.603
CLTCL1	HIP1	ENSLACP00000010273	ENSLACP00000021547	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1.	0.860
CLTCL1	HIP1R	ENSLACP00000010273	ENSLACP00000020325	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1 related.	0.860
CLTCL1	LOC102347431	ENSLACP00000010273	ENSLACP00000018456	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Si:ch211-200p22.4.	0.691