STRINGSTRING
VTI1A VTI1A STX5 STX5 LOC102366142 LOC102366142 USO1 USO1 YIPF7 YIPF7 SEC22B SEC22B YIPF5 YIPF5 YIPF4 YIPF4 VTI1B VTI1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VTI1AVesicle transport through interaction with t-SNAREs 1A. (214 aa)
STX5Syntaxin 5; Belongs to the syntaxin family. (350 aa)
LOC102366142Uncharacterized protein; Belongs to the synaptobrevin family. (216 aa)
USO1USO1 vesicle transport factor. (980 aa)
YIPF7Protein YIPF. (256 aa)
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (215 aa)
YIPF5Protein YIPF. (276 aa)
YIPF4Protein YIPF. (242 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (235 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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