STRINGSTRING
SFRP2 SFRP2 TAF10 TAF10 ITGA3 ITGA3 INHBA INHBA KDM6A KDM6A KDM6B KDM6B H3AM01_LATCH H3AM01_LATCH SMAD1 SMAD1 ITGB4 ITGB4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFRP2Secreted frizzled related protein 2. (294 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (142 aa)
ITGA3Integrin subunit alpha 3; Belongs to the integrin alpha chain family. (1012 aa)
INHBAInhibin subunit beta A. (390 aa)
KDM6ALysine (K)-specific demethylase 6A. (1452 aa)
KDM6BLysine demethylase 6B. (1638 aa)
H3AM01_LATCHIntegrin beta; Belongs to the integrin beta chain family. (769 aa)
SMAD1Mothers against decapentaplegic homolog. (465 aa)
ITGB4Integrin beta. (1787 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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