STRINGSTRING
MYOD1 MYOD1 SMYD1 SMYD1 MYF6 MYF6 EFNB2 EFNB2 AKAP6 AKAP6 MAML1 MAML1 ATP11A ATP11A H3AF01_LATCH H3AF01_LATCH PARP2 PARP2 TRIM32 TRIM32 MYOCD MYOCD H3BFZ2_LATCH H3BFZ2_LATCH H3BFW7_LATCH H3BFW7_LATCH MMP14 MMP14 MTOR MTOR EDN1 EDN1 H3B8U3_LATCH H3B8U3_LATCH CYP26B1 CYP26B1 MYOG MYOG H3B3V9_LATCH H3B3V9_LATCH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MYOD1Myogenic factor. (251 aa)
SMYD1SET and MYND domain containing 1. (479 aa)
MYF6Myogenic factor 6. (272 aa)
EFNB2Ephrin B2; Belongs to the ephrin family. (338 aa)
AKAP6Uncharacterized protein. (901 aa)
MAML1Mastermind like transcriptional coactivator 1. (1039 aa)
ATP11APhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1132 aa)
H3AF01_LATCHUncharacterized protein. (658 aa)
PARP2Poly [ADP-ribose] polymerase. (502 aa)
TRIM32Tripartite motif containing 32. (647 aa)
MYOCDMyocardin. (963 aa)
H3BFZ2_LATCHBHLH domain-containing protein. (165 aa)
H3BFW7_LATCHBHLH domain-containing protein. (161 aa)
MMP14Matrix metallopeptidase 14. (597 aa)
MTORMechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (1009 aa)
EDN1Endothelin 1. (216 aa)
H3B8U3_LATCHSerine/threonine-protein kinase TOR. (1418 aa)
CYP26B1Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family. (511 aa)
MYOGMyogenin. (242 aa)
H3B3V9_LATCHMyogenic factor. (221 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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