(7 nodes) Cardiac myofibril assembly network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NRAP	Nebulin related anchoring protein. (1783 aa)
	LOC102347576	SH3 domain-containing protein. (2968 aa)
	SRF	Serum response factor. (520 aa)
	NKX2-5	NK2 homeobox 5. (296 aa)
	LOC102365660	Uncharacterized protein. (187 aa)
	LOC102366172	Uncharacterized protein. (183 aa)
	CSRP3	Cysteine and glycine rich protein 3. (192 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSRP3	LOC102347576	ENSLACP00000018230	ENSLACP00000007847	Cysteine and glycine rich protein 3.	SH3 domain-containing protein.	0.442
CSRP3	LOC102365660	ENSLACP00000018230	ENSLACP00000017843	Cysteine and glycine rich protein 3.	Uncharacterized protein.	0.546
CSRP3	LOC102366172	ENSLACP00000018230	ENSLACP00000017946	Cysteine and glycine rich protein 3.	Uncharacterized protein.	0.546
CSRP3	NRAP	ENSLACP00000018230	ENSLACP00000002953	Cysteine and glycine rich protein 3.	Nebulin related anchoring protein.	0.576
LOC102347576	CSRP3	ENSLACP00000007847	ENSLACP00000018230	SH3 domain-containing protein.	Cysteine and glycine rich protein 3.	0.442
LOC102347576	LOC102365660	ENSLACP00000007847	ENSLACP00000017843	SH3 domain-containing protein.	Uncharacterized protein.	0.475
LOC102347576	LOC102366172	ENSLACP00000007847	ENSLACP00000017946	SH3 domain-containing protein.	Uncharacterized protein.	0.475
LOC102347576	NRAP	ENSLACP00000007847	ENSLACP00000002953	SH3 domain-containing protein.	Nebulin related anchoring protein.	0.433
LOC102365660	CSRP3	ENSLACP00000017843	ENSLACP00000018230	Uncharacterized protein.	Cysteine and glycine rich protein 3.	0.546
LOC102365660	LOC102347576	ENSLACP00000017843	ENSLACP00000007847	Uncharacterized protein.	SH3 domain-containing protein.	0.475
LOC102365660	NRAP	ENSLACP00000017843	ENSLACP00000002953	Uncharacterized protein.	Nebulin related anchoring protein.	0.431
LOC102366172	CSRP3	ENSLACP00000017946	ENSLACP00000018230	Uncharacterized protein.	Cysteine and glycine rich protein 3.	0.546
LOC102366172	LOC102347576	ENSLACP00000017946	ENSLACP00000007847	Uncharacterized protein.	SH3 domain-containing protein.	0.475
LOC102366172	NRAP	ENSLACP00000017946	ENSLACP00000002953	Uncharacterized protein.	Nebulin related anchoring protein.	0.431
NKX2-5	SRF	ENSLACP00000016921	ENSLACP00000016349	NK2 homeobox 5.	Serum response factor.	0.703
NRAP	CSRP3	ENSLACP00000002953	ENSLACP00000018230	Nebulin related anchoring protein.	Cysteine and glycine rich protein 3.	0.576
NRAP	LOC102347576	ENSLACP00000002953	ENSLACP00000007847	Nebulin related anchoring protein.	SH3 domain-containing protein.	0.433
NRAP	LOC102365660	ENSLACP00000002953	ENSLACP00000017843	Nebulin related anchoring protein.	Uncharacterized protein.	0.431
NRAP	LOC102366172	ENSLACP00000002953	ENSLACP00000017946	Nebulin related anchoring protein.	Uncharacterized protein.	0.431
SRF	NKX2-5	ENSLACP00000016349	ENSLACP00000016921	Serum response factor.	NK2 homeobox 5.	0.703