STRINGSTRING
TET1 TET1 KDM4A KDM4A MMACHC MMACHC PAX6 PAX6 H3B7Z9_LATCH H3B7Z9_LATCH APOBEC2 APOBEC2 PHF2 PHF2 ALKBH3 ALKBH3 KDM3B KDM3B RIOX1 RIOX1 KDM7A KDM7A KDM2B KDM2B TDG TDG LOC102365730 LOC102365730 ALKBH5-2 ALKBH5-2 ALKBH2 ALKBH2 KDM5B KDM5B JMJD1C JMJD1C LOC102364057 LOC102364057 AICDA AICDA APEX1 APEX1 TET3 TET3 FTO FTO ALKBH4 ALKBH4 TET2 TET2 KDM1A KDM1A KDM6B KDM6B H3ACC6_LATCH H3ACC6_LATCH KDM3A KDM3A KDM8 KDM8 KDM1B KDM1B KDM6A KDM6A RIOX2 RIOX2 LOC102357335 LOC102357335 LOC102365533 LOC102365533 PPME1 PPME1 EOMES EOMES H2ZTU8_LATCH H2ZTU8_LATCH KDM5A KDM5A LOC102354446 LOC102354446 KDM2A KDM2A PHF8 PHF8 ALKBH1 ALKBH1 JMJD6 JMJD6 KDM4B KDM4B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TET1Tet methylcytosine dioxygenase 1. (1502 aa)
KDM4AUncharacterized protein. (1075 aa)
MMACHCMetabolism of cobalamin associated C. (242 aa)
PAX6Paired box 6. (463 aa)
H3B7Z9_LATCHUncharacterized protein. (344 aa)
APOBEC2Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (230 aa)
PHF2PHD finger protein 2. (1036 aa)
ALKBH3AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase. (290 aa)
KDM3BLysine demethylase 3B. (1770 aa)
RIOX1Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (612 aa)
KDM7ALysine demethylase 7A. (907 aa)
KDM2BUncharacterized protein. (1261 aa)
TDGThymine DNA glycosylase. (231 aa)
LOC102365730Uncharacterized protein; Belongs to the cytochrome P450 family. (503 aa)
ALKBH5-2AlkB homolog 5, RNA demethylase. (243 aa)
ALKBH2AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. (272 aa)
KDM5BLysine demethylase 5B. (1659 aa)
JMJD1CJumonji domain containing 1C. (2422 aa)
LOC102364057Zgc:101765. (284 aa)
AICDAActivation-induced cytidine deaminase. (149 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (314 aa)
TET3Tet methylcytosine dioxygenase 3. (1688 aa)
FTOFTO alpha-ketoglutarate dependent dioxygenase. (423 aa)
ALKBH4AlkB homolog 4, lysine demethylase. (328 aa)
TET2Tet_JBP domain-containing protein. (2001 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (820 aa)
KDM6BLysine demethylase 6B. (1638 aa)
H3ACC6_LATCHCXXC-type domain-containing protein. (742 aa)
KDM3ALysine demethylase 3A. (1319 aa)
KDM8Lysine demethylase 8. (407 aa)
KDM1BLysine demethylase 1B. (768 aa)
KDM6ALysine (K)-specific demethylase 6A. (1452 aa)
RIOX2Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (464 aa)
LOC102357335Uncharacterized protein; Belongs to the cytochrome P450 family. (334 aa)
LOC102365533PHD-type domain-containing protein. (579 aa)
PPME1Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (294 aa)
EOMESEomesodermin. (419 aa)
H2ZTU8_LATCHUncharacterized protein. (60 aa)
KDM5ALysine demethylase 5A. (1695 aa)
LOC102354446Lysine (K)-specific demethylase 5C. (1507 aa)
KDM2ALysine demethylase 2A. (910 aa)
PHF8PHD finger protein 8. (992 aa)
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (373 aa)
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (403 aa)
KDM4BLysine demethylase 4B. (1136 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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