STRINGSTRING
PAX6 PAX6 H3B7Z9_LATCH H3B7Z9_LATCH APOBEC2 APOBEC2 ALKBH3 ALKBH3 TDG TDG ALKBH1 ALKBH1 H2ZTU8_LATCH H2ZTU8_LATCH EOMES EOMES TET2 TET2 ALKBH4 ALKBH4 FTO FTO TET3 TET3 APEX1 APEX1 AICDA AICDA ALKBH2 ALKBH2 TET1 TET1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PAX6Paired box 6. (463 aa)
H3B7Z9_LATCHUncharacterized protein. (344 aa)
APOBEC2Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (230 aa)
ALKBH3AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase. (290 aa)
TDGThymine DNA glycosylase. (231 aa)
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (373 aa)
H2ZTU8_LATCHUncharacterized protein. (60 aa)
EOMESEomesodermin. (419 aa)
TET2Tet_JBP domain-containing protein. (2001 aa)
ALKBH4AlkB homolog 4, lysine demethylase. (328 aa)
FTOFTO alpha-ketoglutarate dependent dioxygenase. (423 aa)
TET3Tet methylcytosine dioxygenase 3. (1688 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (314 aa)
AICDAActivation-induced cytidine deaminase. (149 aa)
ALKBH2AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. (272 aa)
TET1Tet methylcytosine dioxygenase 1. (1502 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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