STRINGSTRING
LOC102349393 LOC102349393 LOC102349333 LOC102349333 LOC102346204 LOC102346204 CASP6 CASP6 STK4 STK4 ARF6 ARF6 RB1 RB1 LOC102351334 LOC102351334 LOC102348948 LOC102348948
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102349393IF rod domain-containing protein; Belongs to the intermediate filament family. (514 aa)
LOC102349333Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (176 aa)
LOC102346204Protein kinase domain-containing protein. (227 aa)
CASP6Caspase 6; Belongs to the peptidase C14A family. (269 aa)
STK4Serine/threonine kinase 4. (488 aa)
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
RB1Uncharacterized protein. (411 aa)
LOC102351334Scinderin like a. (721 aa)
LOC102348948IF rod domain-containing protein; Belongs to the intermediate filament family. (548 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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