(10 nodes) Modification of synaptic structure network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WASF3	WASP family member 3. (547 aa)
	FILIP1	Filamin A interacting protein 1. (1181 aa)
	H2ZYB6_LATCH	Uncharacterized protein. (324 aa)
	LOC102349535	Uncharacterized protein. (176 aa)
	LOC102362853	Si:ch73-362m14.4. (500 aa)
	DLGAP3	DLG associated protein 3. (975 aa)
	BAIAP2	BAI1 associated protein 2. (434 aa)
	CYFIP1	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1259 aa)
	CDC42	Cell division cycle 42. (156 aa)
	H3BAT5_LATCH	Uncharacterized protein. (900 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAIAP2	CDC42	ENSLACP00000017063	ENSLACP00000018010	BAI1 associated protein 2.	Cell division cycle 42.	0.977
BAIAP2	CYFIP1	ENSLACP00000017063	ENSLACP00000017989	BAI1 associated protein 2.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.818
BAIAP2	LOC102349535	ENSLACP00000017063	ENSLACP00000002799	BAI1 associated protein 2.	Uncharacterized protein.	0.876
BAIAP2	LOC102362853	ENSLACP00000017063	ENSLACP00000010409	BAI1 associated protein 2.	Si:ch73-362m14.4.	0.725
BAIAP2	WASF3	ENSLACP00000017063	ENSLACP00000001758	BAI1 associated protein 2.	WASP family member 3.	0.754
CDC42	BAIAP2	ENSLACP00000018010	ENSLACP00000017063	Cell division cycle 42.	BAI1 associated protein 2.	0.977
CDC42	CYFIP1	ENSLACP00000018010	ENSLACP00000017989	Cell division cycle 42.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.722
CDC42	LOC102349535	ENSLACP00000018010	ENSLACP00000002799	Cell division cycle 42.	Uncharacterized protein.	0.785
CDC42	LOC102362853	ENSLACP00000018010	ENSLACP00000010409	Cell division cycle 42.	Si:ch73-362m14.4.	0.580
CDC42	WASF3	ENSLACP00000018010	ENSLACP00000001758	Cell division cycle 42.	WASP family member 3.	0.704
CYFIP1	BAIAP2	ENSLACP00000017989	ENSLACP00000017063	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	BAI1 associated protein 2.	0.818
CYFIP1	CDC42	ENSLACP00000017989	ENSLACP00000018010	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	Cell division cycle 42.	0.722
CYFIP1	LOC102349535	ENSLACP00000017989	ENSLACP00000002799	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	Uncharacterized protein.	0.992
CYFIP1	LOC102362853	ENSLACP00000017989	ENSLACP00000010409	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	Si:ch73-362m14.4.	0.876
CYFIP1	WASF3	ENSLACP00000017989	ENSLACP00000001758	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	WASP family member 3.	0.906
LOC102349535	BAIAP2	ENSLACP00000002799	ENSLACP00000017063	Uncharacterized protein.	BAI1 associated protein 2.	0.876
LOC102349535	CDC42	ENSLACP00000002799	ENSLACP00000018010	Uncharacterized protein.	Cell division cycle 42.	0.785
LOC102349535	CYFIP1	ENSLACP00000002799	ENSLACP00000017989	Uncharacterized protein.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.992
LOC102349535	WASF3	ENSLACP00000002799	ENSLACP00000001758	Uncharacterized protein.	WASP family member 3.	0.564
LOC102362853	BAIAP2	ENSLACP00000010409	ENSLACP00000017063	Si:ch73-362m14.4.	BAI1 associated protein 2.	0.725