(13 nodes) Regulation of transcription of nucleolar large rRNA by RNA polymerase I network (Latimeria chalumnae)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	MACROH2A1	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (370 aa)
	DDX11	DEAD/H-box helicase 11. (909 aa)
	SIRT7	Sirtuin 7. (413 aa)
	SMARCB1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (384 aa)
	PIH1D1	Uncharacterized protein. (294 aa)
	PWP1	PWP1 homolog, endonuclein. (495 aa)
	NOL11	Nucleolar protein 11. (731 aa)
	MACROH2A2	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (376 aa)
	H3B8U3_LATCH	Serine/threonine-protein kinase TOR. (1418 aa)
	MTOR	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (1009 aa)
	NOP53	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (399 aa)
	IPPK	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). (489 aa)
	MARS1	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (905 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3B8U3_LATCH	MTOR	ENSLACP00000018314	ENSLACP00000018843	Serine/threonine-protein kinase TOR.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.944
MACROH2A1	SIRT7	ENSLACP00000013357	ENSLACP00000010190	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	Sirtuin 7.	0.490
MACROH2A1	SMARCB1	ENSLACP00000013357	ENSLACP00000010836	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.734
MACROH2A2	SMARCB1	ENSLACP00000016927	ENSLACP00000010836	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.734
MTOR	H3B8U3_LATCH	ENSLACP00000018843	ENSLACP00000018314	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Serine/threonine-protein kinase TOR.	0.944
NOP53	PIH1D1	ENSLACP00000020851	ENSLACP00000014541	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	Uncharacterized protein.	0.423
NOP53	PWP1	ENSLACP00000020851	ENSLACP00000014831	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	PWP1 homolog, endonuclein.	0.648
PIH1D1	NOP53	ENSLACP00000014541	ENSLACP00000020851	Uncharacterized protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.423
PWP1	NOP53	ENSLACP00000014831	ENSLACP00000020851	PWP1 homolog, endonuclein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.648
SIRT7	MACROH2A1	ENSLACP00000010190	ENSLACP00000013357	Sirtuin 7.	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	0.490
SMARCB1	MACROH2A1	ENSLACP00000010836	ENSLACP00000013357	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	0.734
SMARCB1	MACROH2A2	ENSLACP00000010836	ENSLACP00000016927	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.	0.734