STRINGSTRING
NCK1 NCK1 NCK2 NCK2 TMED2 TMED2 PPP1R15B PPP1R15B DNAJC3 DNAJC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCK1Cytoplasmic protein. (377 aa)
NCK2Cytoplasmic protein. (380 aa)
TMED2Transmembrane p24 trafficking protein 2. (208 aa)
PPP1R15BProtein phosphatase 1 regulatory subunit 15B. (703 aa)
DNAJC3DnaJ heat shock protein family (Hsp40) member C3. (513 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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