STRINGSTRING
SPATC1 SPATC1 SIRT1 SIRT1 RAPGEF2 RAPGEF2 ATP2B4 ATP2B4 C1QTNF9 C1QTNF9 LOC102346019 LOC102346019 SPATC1L SPATC1L ADIPOQ ADIPOQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPATC1Uncharacterized protein. (225 aa)
SIRT1Sirtuin 1. (729 aa)
RAPGEF2Rap guanine nucleotide exchange factor 2. (1514 aa)
ATP2B4Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1233 aa)
C1QTNF9C1q domain-containing protein. (198 aa)
LOC102346019C1q domain-containing protein. (226 aa)
SPATC1LSperiolin_C domain-containing protein. (362 aa)
ADIPOQAdiponectin, C1Q and collagen domain containing. (259 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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