(16 nodes) Integral component of mitochondrial outer membrane network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPIRE1	Spire type actin nucleation factor 1. (535 aa)
	H3APB7_LATCH	Mitochondrial E3 ubiquitin protein ligase 1a. (243 aa)
	FUNDC1	FUN14 domain containing 1. (152 aa)
	SYNJ2BP	PDZ domain-containing protein. (107 aa)
	GDAP1L1	Ganglioside induced differentiation associated protein 1 like 1. (365 aa)
	BNIP3	BCL2 interacting protein 3. (202 aa)
	GDAP1	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (355 aa)
	FUNDC2	FUN14 domain containing 2. (168 aa)
	RHOT1	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (673 aa)
	PINK1	PTEN induced kinase 1. (467 aa)
	LOC102348880	KIND domain-containing protein. (635 aa)
	MUL1	Mitochondrial E3 ubiquitin protein ligase 1. (352 aa)
	CFAP70	Cilia and flagella associated protein 70. (1141 aa)
	TOMM70	Translocase of outer mitochondrial membrane 70. (601 aa)
	LOC102354722	Uncharacterized protein. (116 aa)
	RHOT2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (589 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BNIP3	FUNDC1	ENSLACP00000014880	ENSLACP00000011607	BCL2 interacting protein 3.	FUN14 domain containing 1.	0.674
BNIP3	FUNDC2	ENSLACP00000014880	ENSLACP00000016668	BCL2 interacting protein 3.	FUN14 domain containing 2.	0.418
BNIP3	LOC102354722	ENSLACP00000014880	ENSLACP00000003501	BCL2 interacting protein 3.	Uncharacterized protein.	0.901
BNIP3	PINK1	ENSLACP00000014880	ENSLACP00000020138	BCL2 interacting protein 3.	PTEN induced kinase 1.	0.556
CFAP70	H3APB7_LATCH	ENSLACP00000023284	ENSLACP00000011488	Cilia and flagella associated protein 70.	Mitochondrial E3 ubiquitin protein ligase 1a.	0.461
CFAP70	MUL1	ENSLACP00000023284	ENSLACP00000022155	Cilia and flagella associated protein 70.	Mitochondrial E3 ubiquitin protein ligase 1.	0.461
CFAP70	PINK1	ENSLACP00000023284	ENSLACP00000020138	Cilia and flagella associated protein 70.	PTEN induced kinase 1.	0.559
CFAP70	TOMM70	ENSLACP00000023284	ENSLACP00000006401	Cilia and flagella associated protein 70.	Translocase of outer mitochondrial membrane 70.	0.679
FUNDC1	BNIP3	ENSLACP00000011607	ENSLACP00000014880	FUN14 domain containing 1.	BCL2 interacting protein 3.	0.674
FUNDC1	LOC102354722	ENSLACP00000011607	ENSLACP00000003501	FUN14 domain containing 1.	Uncharacterized protein.	0.450
FUNDC1	PINK1	ENSLACP00000011607	ENSLACP00000020138	FUN14 domain containing 1.	PTEN induced kinase 1.	0.823
FUNDC2	BNIP3	ENSLACP00000016668	ENSLACP00000014880	FUN14 domain containing 2.	BCL2 interacting protein 3.	0.418
FUNDC2	LOC102354722	ENSLACP00000016668	ENSLACP00000003501	FUN14 domain containing 2.	Uncharacterized protein.	0.418
FUNDC2	PINK1	ENSLACP00000016668	ENSLACP00000020138	FUN14 domain containing 2.	PTEN induced kinase 1.	0.465
H3APB7_LATCH	CFAP70	ENSLACP00000011488	ENSLACP00000023284	Mitochondrial E3 ubiquitin protein ligase 1a.	Cilia and flagella associated protein 70.	0.461
H3APB7_LATCH	RHOT1	ENSLACP00000011488	ENSLACP00000018969	Mitochondrial E3 ubiquitin protein ligase 1a.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.461
H3APB7_LATCH	RHOT2	ENSLACP00000011488	ENSLACP00000001250	Mitochondrial E3 ubiquitin protein ligase 1a.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.461
H3APB7_LATCH	TOMM70	ENSLACP00000011488	ENSLACP00000006401	Mitochondrial E3 ubiquitin protein ligase 1a.	Translocase of outer mitochondrial membrane 70.	0.616
LOC102354722	BNIP3	ENSLACP00000003501	ENSLACP00000014880	Uncharacterized protein.	BCL2 interacting protein 3.	0.901
LOC102354722	FUNDC1	ENSLACP00000003501	ENSLACP00000011607	Uncharacterized protein.	FUN14 domain containing 1.	0.450