(9 nodes) MHC class I peptide loading complex network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZBTB43	Zinc finger and BTB domain containing 43. (433 aa)
	ZBTB22	Zinc finger and BTB domain containing 22. (463 aa)
	LOC106706091	Uncharacterized protein. (503 aa)
	ZBTB9	Zinc finger and BTB domain containing 9. (424 aa)
	TAPBP	Uncharacterized protein. (453 aa)
	PDIA3	Protein disulfide-isomerase. (497 aa)
	TAP2	Transporter associated with antigen processing, subunit type a. (720 aa)
	TAP1	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (735 aa)
	ABCB9	ATP binding cassette subfamily B member 9. (779 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB9	LOC106706091	ENSLACP00000020226	ENSLACP00000003447	ATP binding cassette subfamily B member 9.	Uncharacterized protein.	0.418
ABCB9	PDIA3	ENSLACP00000020226	ENSLACP00000015133	ATP binding cassette subfamily B member 9.	Protein disulfide-isomerase.	0.538
ABCB9	TAP2	ENSLACP00000020226	ENSLACP00000015839	ATP binding cassette subfamily B member 9.	Transporter associated with antigen processing, subunit type a.	0.984
ABCB9	TAPBP	ENSLACP00000020226	ENSLACP00000010397	ATP binding cassette subfamily B member 9.	Uncharacterized protein.	0.788
LOC106706091	ABCB9	ENSLACP00000003447	ENSLACP00000020226	Uncharacterized protein.	ATP binding cassette subfamily B member 9.	0.418
LOC106706091	PDIA3	ENSLACP00000003447	ENSLACP00000015133	Uncharacterized protein.	Protein disulfide-isomerase.	0.904
LOC106706091	TAP1	ENSLACP00000003447	ENSLACP00000016040	Uncharacterized protein.	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	0.939
LOC106706091	TAP2	ENSLACP00000003447	ENSLACP00000015839	Uncharacterized protein.	Transporter associated with antigen processing, subunit type a.	0.939
LOC106706091	TAPBP	ENSLACP00000003447	ENSLACP00000010397	Uncharacterized protein.	Uncharacterized protein.	0.984
PDIA3	ABCB9	ENSLACP00000015133	ENSLACP00000020226	Protein disulfide-isomerase.	ATP binding cassette subfamily B member 9.	0.538
PDIA3	LOC106706091	ENSLACP00000015133	ENSLACP00000003447	Protein disulfide-isomerase.	Uncharacterized protein.	0.904
PDIA3	TAP1	ENSLACP00000015133	ENSLACP00000016040	Protein disulfide-isomerase.	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	0.951
PDIA3	TAP2	ENSLACP00000015133	ENSLACP00000015839	Protein disulfide-isomerase.	Transporter associated with antigen processing, subunit type a.	0.962
PDIA3	TAPBP	ENSLACP00000015133	ENSLACP00000010397	Protein disulfide-isomerase.	Uncharacterized protein.	0.997
TAP1	LOC106706091	ENSLACP00000016040	ENSLACP00000003447	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	Uncharacterized protein.	0.939
TAP1	PDIA3	ENSLACP00000016040	ENSLACP00000015133	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	Protein disulfide-isomerase.	0.951
TAP1	TAP2	ENSLACP00000016040	ENSLACP00000015839	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	Transporter associated with antigen processing, subunit type a.	0.998
TAP1	TAPBP	ENSLACP00000016040	ENSLACP00000010397	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	Uncharacterized protein.	0.955
TAP2	ABCB9	ENSLACP00000015839	ENSLACP00000020226	Transporter associated with antigen processing, subunit type a.	ATP binding cassette subfamily B member 9.	0.984
TAP2	LOC106706091	ENSLACP00000015839	ENSLACP00000003447	Transporter associated with antigen processing, subunit type a.	Uncharacterized protein.	0.939