STRINGSTRING
SYS1 SYS1 MARCHF9 MARCHF9 GRN GRN GOLGA2 GOLGA2 SNX9 SNX9 NDST1 NDST1 GBF1 GBF1 AP4B1 AP4B1 POLI POLI TMEM115 TMEM115 ARFGEF2 ARFGEF2 YIPF2 YIPF2 B4GALNT4 B4GALNT4 ST3GAL3 ST3GAL3 FUT8 FUT8 LOC102353426 LOC102353426 MFSD5 MFSD5 PHETA1 PHETA1 YIPF6 YIPF6 RAB7B RAB7B LOC102365926 LOC102365926 LPCAT2 LPCAT2 VPS13B VPS13B H3B194_LATCH H3B194_LATCH H3AZF3_LATCH H3AZF3_LATCH TMEM165 TMEM165 ARFIP2 ARFIP2 ATP9A ATP9A ARAP3 ARAP3 GOLPH3L GOLPH3L ARAP1 ARAP1 ATXN2 ATXN2 ATP7A ATP7A H3AWN0_LATCH H3AWN0_LATCH GOSR1 GOSR1 TEPSIN TEPSIN GCC1 GCC1 LOC102363669 LOC102363669 LRBA LRBA VAMP4 VAMP4 FUT9 FUT9 SLC30A6 SLC30A6 ARAP2 ARAP2 ARHGEF38 ARHGEF38 GOLGA4 GOLGA4 RELCH RELCH H3AQF7_LATCH H3AQF7_LATCH STX8 STX8 KLHL20 KLHL20 H3AMW7_LATCH H3AMW7_LATCH H3AMG4_LATCH H3AMG4_LATCH YIPF1 YIPF1 ARL1 ARL1 HID1 HID1 B4GALNT3 B4GALNT3 LOC102349503 LOC102349503 FAM91A1 FAM91A1 NBEA NBEA TMEM87B TMEM87B MARCHF4 MARCHF4 CSGALNACT1 CSGALNACT1 NECAB3 NECAB3 ATP2C1 ATP2C1 CCDC91 CCDC91 CBY1 CBY1 TMEM87A TMEM87A ARFGEF1 ARFGEF1 RUNDC1 RUNDC1 RAB31 RAB31 ATP2C2 ATP2C2 GPER1 GPER1 PLEKHA8 PLEKHA8 ST3GAL2 ST3GAL2 CSGALNACT2 CSGALNACT2 TMEM130 TMEM130 MARCHF1 MARCHF1 RAB30 RAB30 HOOK2 HOOK2 GCC2 GCC2 H3ABF0_LATCH H3ABF0_LATCH GBA GBA SLC66A2 SLC66A2 ATP7B ATP7B LOC102359113 LOC102359113 SLC25A45 SLC25A45 LLGL1 LLGL1 WLS WLS ATP9B ATP9B LOC102350617 LOC102350617 H2ZT09_LATCH H2ZT09_LATCH H2ZU69_LATCH H2ZU69_LATCH SCAMP2 SCAMP2 SMPD3 SMPD3 H2ZWA4_LATCH H2ZWA4_LATCH GALNT2 GALNT2 IMPAD1 IMPAD1 ARFRP1 ARFRP1 TBC1D23 TBC1D23 SLC39A9 SLC39A9 GOLPH3 GOLPH3 RAB29 RAB29 TMBIM4 TMBIM4 EIPR1 EIPR1 CABP7 CABP7 GGA3 GGA3 BET1L BET1L SYT11 SYT11 LOC102367449 LOC102367449 ARFIP1 ARFIP1 LOC102347296 LOC102347296 H3A5S6_LATCH H3A5S6_LATCH C17orf75 C17orf75 LOC102363599 LOC102363599 LOC102345200 LOC102345200 GOLGA5 GOLGA5 MMP24 MMP24 LOC102358544 LOC102358544 B3GALT6 B3GALT6 FAM114A2 FAM114A2 VRK1 VRK1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
MARCHF9Membrane associated ring-CH-type finger 9. (339 aa)
GRNGranulin precursor. (751 aa)
GOLGA2Golgin A2. (1023 aa)
SNX9Sorting nexin 9. (467 aa)
NDST1N-deacetylase and N-sulfotransferase 1. (883 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1912 aa)
AP4B1AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (731 aa)
POLIDNA polymerase iota. (740 aa)
TMEM115Transmembrane protein 115. (357 aa)
ARFGEF2ADP ribosylation factor guanine nucleotide exchange factor 2. (1803 aa)
YIPF2Protein YIPF. (305 aa)
B4GALNT4Hexosyltransferase. (1011 aa)
ST3GAL3ST3 beta-galactoside alpha-2,3-sialyltransferase 3; Belongs to the glycosyltransferase 29 family. (250 aa)
FUT8Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family. (577 aa)
LOC102353426Uncharacterized protein. (286 aa)
MFSD5Major facilitator superfamily domain containing 5. (410 aa)
PHETA1Si:ch211-193c2.2. (282 aa)
YIPF6Protein YIPF. (239 aa)
RAB7BRAB7B, member RAS oncogene family. (201 aa)
LOC102365926Si:dkey-246g23.2. (244 aa)
LPCAT2Lysophosphatidylcholine acyltransferase 2. (495 aa)
VPS13BUncharacterized protein. (2273 aa)
H3B194_LATCHConsortin_C domain-containing protein. (504 aa)
H3AZF3_LATCHUncharacterized protein. (844 aa)
TMEM165Transmembrane protein 165. (420 aa)
ARFIP2ADP ribosylation factor interacting protein 2. (234 aa)
ATP9APhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1035 aa)
ARAP3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3. (1502 aa)
GOLPH3LGolgi phosphoprotein 3 like. (286 aa)
ARAP1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1. (1027 aa)
ATXN2Ataxin 2. (1085 aa)
ATP7AATPase copper transporting alpha. (1266 aa)
H3AWN0_LATCHUncharacterized protein. (479 aa)
GOSR1Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
TEPSINTEPSIN adaptor related protein complex 4 accessory protein. (438 aa)
GCC1GRIP and coiled-coil domain containing 1. (789 aa)
LOC102363669N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3. (876 aa)
LRBALPS responsive beige-like anchor protein. (2031 aa)
VAMP4Vesicle associated membrane protein 4. (141 aa)
FUT9Fucosyltransferase 9. (358 aa)
SLC30A6Solute carrier family 30 member 6. (531 aa)
ARAP2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2. (990 aa)
ARHGEF38Rho guanine nucleotide exchange factor 38. (800 aa)
GOLGA4Golgin A4. (2330 aa)
RELCHRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (1037 aa)
H3AQF7_LATCHUncharacterized protein. (88 aa)
STX8Syntaxin 8. (235 aa)
KLHL20Kelch like family member 20. (609 aa)
H3AMW7_LATCHUncharacterized protein. (445 aa)
H3AMG4_LATCHUncharacterized protein. (141 aa)
YIPF1Protein YIPF. (309 aa)
ARL1ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family. (171 aa)
HID1HID1 domain containing. (873 aa)
B4GALNT3Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans. (1066 aa)
LOC102349503Uncharacterized protein. (300 aa)
FAM91A1Family with sequence similarity 91 member A1. (841 aa)
NBEAUncharacterized protein. (1801 aa)
TMEM87BTransmembrane protein 87B. (401 aa)
MARCHF4Membrane associated ring-CH-type finger 4. (266 aa)
CSGALNACT1Hexosyltransferase. (531 aa)
NECAB3N-terminal EF-hand calcium binding protein 3. (303 aa)
ATP2C1Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (901 aa)
CCDC91Coiled-coil domain containing 91. (450 aa)
CBY1Uncharacterized protein. (127 aa)
TMEM87ATransmembrane protein 87A. (508 aa)
ARFGEF1ADP ribosylation factor guanine nucleotide exchange factor 1. (1801 aa)
RUNDC1RUN domain containing 1. (571 aa)
RAB31RAB31, member RAS oncogene family. (195 aa)
ATP2C2ATPase secretory pathway Ca2+ transporting 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (765 aa)
GPER1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (366 aa)
PLEKHA8Pleckstrin homology domain containing A8. (536 aa)
ST3GAL2Alpha2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (349 aa)
CSGALNACT2Hexosyltransferase. (333 aa)
TMEM130Transmembrane protein 130. (417 aa)
MARCHF1Membrane associated ring-CH-type finger 1. (496 aa)
RAB30RAB30, member RAS oncogene family. (203 aa)
HOOK2Hook microtubule tethering protein 2. (721 aa)
GCC2GRIP and coiled-coil domain containing 2. (1695 aa)
H3ABF0_LATCHChorein_N domain-containing protein. (777 aa)
GBAGlucosylceramidase. (517 aa)
SLC66A2Solute carrier family 66 member 2. (270 aa)
ATP7BATPase copper transporting beta. (1431 aa)
LOC102359113Uncharacterized protein. (455 aa)
SLC25A45Solute carrier family 25 member 45; Belongs to the mitochondrial carrier (TC 2.A.29) family. (290 aa)
LLGL1LLGL scribble cell polarity complex component 1. (997 aa)
WLSWnt ligand secretion mediator. (541 aa)
ATP9BPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (790 aa)
LOC102350617Uncharacterized protein. (222 aa)
H2ZT09_LATCHL-Fucosyltransferase; Belongs to the glycosyltransferase 11 family. (203 aa)
H2ZU69_LATCHGSAP-16 domain-containing protein. (549 aa)
SCAMP2Secretory carrier-associated membrane protein. (259 aa)
SMPD3Sphingomyelin phosphodiesterase 3. (657 aa)
H2ZWA4_LATCHUncharacterized protein. (297 aa)
GALNT2Polypeptide N-acetylgalactosaminyltransferase. (561 aa)
IMPAD1Inositol monophosphatase domain containing 1. (350 aa)
ARFRP1ADP ribosylation factor related protein 1. (121 aa)
TBC1D23TBC1 domain family member 23. (684 aa)
SLC39A9Solute carrier family 39 member 9. (303 aa)
GOLPH3Golgi phosphoprotein 3. (294 aa)
RAB29RAB29, member RAS oncogene family. (206 aa)
TMBIM4Transmembrane BAX inhibitor motif containing 4; Belongs to the BI1 family. (283 aa)
EIPR1EARP complex and GARP complex interacting protein 1. (387 aa)
CABP7Calcium binding protein 7. (206 aa)
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (736 aa)
BET1LBet1 golgi vesicular membrane trafficking protein like. (112 aa)
SYT11Synaptotagmin 11. (429 aa)
LOC102367449Zgc:162698. (590 aa)
ARFIP1ADP ribosylation factor interacting protein 1. (252 aa)
LOC102347296Uncharacterized protein. (876 aa)
H3A5S6_LATCHUncharacterized protein. (304 aa)
C17orf75Chromosome 17 open reading frame 75. (396 aa)
LOC102363599Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (230 aa)
LOC102345200Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (229 aa)
GOLGA5Golgin A5. (739 aa)
MMP24Matrix metallopeptidase 24. (608 aa)
LOC102358544Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (333 aa)
B3GALT6Hexosyltransferase. (333 aa)
FAM114A2Family with sequence similarity 114 member A2. (438 aa)
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (480 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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