15 items (Latimeria chalumnae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FABP3	Fatty acid binding protein 3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
	FABP1	Fatty acid binding protein 1. (98 aa)
	RBP5	Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
	CRABP1	Cellular retinoic acid binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (138 aa)
	RBP7	Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
	LOC102354903	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
	RBP1	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
	LOC102355163	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
	FABP7	Fatty acid binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
	LOC102355426	Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)
	RBP2	Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
	FABP6	Fatty acid binding protein 6. (127 aa)
	FABP2	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
	LOC102348294	Fatty acid binding protein 10a, liver basic. (126 aa)
	CRABP2	Cellular retinoic acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (138 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRABP2	FABP6	ENSLACP00000019097	ENSLACP00000012779	Cellular retinoic acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 6.	0.494
FABP1	FABP2	ENSLACP00000000844	ENSLACP00000013938	Fatty acid binding protein 1.	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.820
FABP2	FABP1	ENSLACP00000013938	ENSLACP00000000844	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 1.	0.820
FABP2	FABP6	ENSLACP00000013938	ENSLACP00000012779	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 6.	0.870
FABP2	LOC102348294	ENSLACP00000013938	ENSLACP00000018223	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 10a, liver basic.	0.574
FABP2	RBP2	ENSLACP00000013938	ENSLACP00000009711	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.447
FABP3	FABP6	ENSLACP00000019236	ENSLACP00000012779	Fatty acid binding protein 3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 6.	0.772
FABP3	LOC102355163	ENSLACP00000019236	ENSLACP00000008903	Fatty acid binding protein 3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.902
FABP6	CRABP2	ENSLACP00000012779	ENSLACP00000019097	Fatty acid binding protein 6.	Cellular retinoic acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.494
FABP6	FABP2	ENSLACP00000012779	ENSLACP00000013938	Fatty acid binding protein 6.	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.870
FABP6	FABP3	ENSLACP00000012779	ENSLACP00000019236	Fatty acid binding protein 6.	Fatty acid binding protein 3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.772
FABP6	FABP7	ENSLACP00000012779	ENSLACP00000009475	Fatty acid binding protein 6.	Fatty acid binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.658
FABP6	LOC102355426	ENSLACP00000012779	ENSLACP00000009652	Fatty acid binding protein 6.	Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.590
FABP7	FABP6	ENSLACP00000009475	ENSLACP00000012779	Fatty acid binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 6.	0.658
LOC102348294	FABP2	ENSLACP00000018223	ENSLACP00000013938	Fatty acid binding protein 10a, liver basic.	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.574
LOC102355163	FABP3	ENSLACP00000008903	ENSLACP00000019236	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.902
LOC102355426	FABP6	ENSLACP00000009652	ENSLACP00000012779	Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 6.	0.590
RBP2	FABP2	ENSLACP00000009711	ENSLACP00000013938	Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.447