Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CHD3 | H3AHS5_LATCH | ENSLACP00000009098 | ENSLACP00000009196 | Chromodomain helicase DNA binding protein 3. | Uncharacterized protein. | 0.420 |
| CHD3 | UBTF | ENSLACP00000009098 | ENSLACP00000019142 | Chromodomain helicase DNA binding protein 3. | Upstream binding transcription factor. | 0.420 |
| H3AHS5_LATCH | CHD3 | ENSLACP00000009196 | ENSLACP00000009098 | Uncharacterized protein. | Chromodomain helicase DNA binding protein 3. | 0.420 |
| H3AHS5_LATCH | SSRP1 | ENSLACP00000009196 | ENSLACP00000003964 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.495 |
| H3AJR0_LATCH | LEF1 | ENSLACP00000009881 | ENSLACP00000005598 | SRY-box transcription factor 13. | Lymphoid enhancer binding factor 1. | 0.505 |
| H3AJR0_LATCH | SOX5 | ENSLACP00000009881 | ENSLACP00000022286 | SRY-box transcription factor 13. | SRY-box transcription factor 5. | 0.484 |
| H3AJR0_LATCH | TCF7 | ENSLACP00000009881 | ENSLACP00000018894 | SRY-box transcription factor 13. | Transcription factor 7. | 0.545 |
| HMG20A | SSRP1 | ENSLACP00000021993 | ENSLACP00000003964 | High mobility group 20A. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.468 |
| HMGB1 | SMARCE1 | ENSLACP00000007563 | ENSLACP00000015784 | High mobility group box 1. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. | 0.540 |
| HMGB1 | SSRP1 | ENSLACP00000007563 | ENSLACP00000003964 | High mobility group box 1. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.469 |
| HMGB2 | SMARCE1 | ENSLACP00000003697 | ENSLACP00000015784 | High mobility group box 2. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. | 0.540 |
| HMGB2 | SSRP1 | ENSLACP00000003697 | ENSLACP00000003964 | High mobility group box 2. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.469 |
| HMGB3 | SMARCE1 | ENSLACP00000017162 | ENSLACP00000015784 | High mobility group box 3. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. | 0.519 |
| HMGB3 | SSRP1 | ENSLACP00000017162 | ENSLACP00000003964 | High mobility group box 3. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.468 |
| LEF1 | H3AJR0_LATCH | ENSLACP00000005598 | ENSLACP00000009881 | Lymphoid enhancer binding factor 1. | SRY-box transcription factor 13. | 0.505 |
| LEF1 | LOC102349405 | ENSLACP00000005598 | ENSLACP00000008336 | Lymphoid enhancer binding factor 1. | Transcription factor SOX. | 0.558 |
| LEF1 | SOX11 | ENSLACP00000005598 | ENSLACP00000016790 | Lymphoid enhancer binding factor 1. | Transcription factor SOX. | 0.558 |
| LEF1 | SOX17 | ENSLACP00000005598 | ENSLACP00000017352 | Lymphoid enhancer binding factor 1. | SRY-box transcription factor 17. | 0.962 |
| LEF1 | SOX18 | ENSLACP00000005598 | ENSLACP00000005708 | Lymphoid enhancer binding factor 1. | SRY-box transcription factor 18. | 0.642 |
| LEF1 | SOX2 | ENSLACP00000005598 | ENSLACP00000007400 | Lymphoid enhancer binding factor 1. | SRY-box transcription factor 2. | 0.523 |
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