18 items (Latimeria chalumnae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102362583	Phosphodiesterase. (865 aa)
	H3A551_LATCH	Phosphodiesterase. (437 aa)
	LOC102355329	Cyclic nucleotide-binding domain-containing protein. (162 aa)
	PDE5A	Phosphodiesterase. (722 aa)
	PRKG1	Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily. (330 aa)
	PDE2A	Phosphodiesterase. (705 aa)
	H3AD75_LATCH	PKcGMP_CC domain-containing protein. (89 aa)
	NOS1	Nitric oxide synthase 1. (1476 aa)
	PDE9A	Phosphodiesterase. (519 aa)
	LOC102345412	Si:dkey-121j17.5. (606 aa)
	PDE11A	Phosphodiesterase. (574 aa)
	LOC102361824	cGMP-dependent protein kinase. (761 aa)
	LOC102360622	Phosphodiesterase. (504 aa)
	LOC102357627	cGMP-dependent protein kinase. (729 aa)
	KCNMB3	Potassium calcium-activated channel subfamily M regulatory beta subunit 3. (247 aa)
	NOS2	Nitric oxide synthase; Produces nitric oxide (NO). (1126 aa)
	MRVI1	Murine retrovirus integration site 1 homolog. (802 aa)
	LYVE1	Link domain-containing protein. (284 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3AD75_LATCH	LYVE1	ENSLACP00000007596	ENSLACP00000021999	PKcGMP_CC domain-containing protein.	Link domain-containing protein.	0.504
H3AD75_LATCH	MRVI1	ENSLACP00000007596	ENSLACP00000020776	PKcGMP_CC domain-containing protein.	Murine retrovirus integration site 1 homolog.	0.504
LOC102345412	LYVE1	ENSLACP00000011880	ENSLACP00000021999	Si:dkey-121j17.5.	Link domain-containing protein.	0.504
LOC102345412	MRVI1	ENSLACP00000011880	ENSLACP00000020776	Si:dkey-121j17.5.	Murine retrovirus integration site 1 homolog.	0.504
LOC102355329	LYVE1	ENSLACP00000005059	ENSLACP00000021999	Cyclic nucleotide-binding domain-containing protein.	Link domain-containing protein.	0.460
LOC102355329	MRVI1	ENSLACP00000005059	ENSLACP00000020776	Cyclic nucleotide-binding domain-containing protein.	Murine retrovirus integration site 1 homolog.	0.460
LOC102355329	PRKG1	ENSLACP00000005059	ENSLACP00000006025	Cyclic nucleotide-binding domain-containing protein.	Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.	0.899
LOC102357627	LYVE1	ENSLACP00000017232	ENSLACP00000021999	cGMP-dependent protein kinase.	Link domain-containing protein.	0.504
LOC102357627	MRVI1	ENSLACP00000017232	ENSLACP00000020776	cGMP-dependent protein kinase.	Murine retrovirus integration site 1 homolog.	0.504
LOC102360622	PDE5A	ENSLACP00000016760	ENSLACP00000006010	Phosphodiesterase.	Phosphodiesterase.	0.429
LOC102361824	LYVE1	ENSLACP00000013122	ENSLACP00000021999	cGMP-dependent protein kinase.	Link domain-containing protein.	0.504
LOC102361824	MRVI1	ENSLACP00000013122	ENSLACP00000020776	cGMP-dependent protein kinase.	Murine retrovirus integration site 1 homolog.	0.504
LOC102362583	PDE5A	ENSLACP00000003652	ENSLACP00000006010	Phosphodiesterase.	Phosphodiesterase.	0.701
LYVE1	H3AD75_LATCH	ENSLACP00000021999	ENSLACP00000007596	Link domain-containing protein.	PKcGMP_CC domain-containing protein.	0.504
LYVE1	LOC102345412	ENSLACP00000021999	ENSLACP00000011880	Link domain-containing protein.	Si:dkey-121j17.5.	0.504
LYVE1	LOC102355329	ENSLACP00000021999	ENSLACP00000005059	Link domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.460
LYVE1	LOC102357627	ENSLACP00000021999	ENSLACP00000017232	Link domain-containing protein.	cGMP-dependent protein kinase.	0.504
LYVE1	LOC102361824	ENSLACP00000021999	ENSLACP00000013122	Link domain-containing protein.	cGMP-dependent protein kinase.	0.504
LYVE1	PRKG1	ENSLACP00000021999	ENSLACP00000006025	Link domain-containing protein.	Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.	0.504
MRVI1	H3AD75_LATCH	ENSLACP00000020776	ENSLACP00000007596	Murine retrovirus integration site 1 homolog.	PKcGMP_CC domain-containing protein.	0.504