STRINGSTRING
PARN PARN EIF4A3 EIF4A3 CNOT8 CNOT8 TUT7 TUT7 CNOT4 CNOT4 EIF4A1 EIF4A1 LOC102359475 LOC102359475 LOC102345373 LOC102345373 CNOT6L CNOT6L EIF4G1 EIF4G1 PABPC1L PABPC1L CNOT2 CNOT2 EIF4E EIF4E CNOT7 CNOT7 CNOT3 CNOT3 TUT4 TUT4 CNOT1 CNOT1 TUT1 TUT1 CNOT10 CNOT10 PABPC4 PABPC4 CNOT11 CNOT11 H3B5X1_LATCH H3B5X1_LATCH PAN3 PAN3 EIF4B EIF4B CNOT9 CNOT9 EIF4A2 EIF4A2 PAN2 PAN2 LRRC27 LRRC27
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PARNPoly(A)-specific ribonuclease. (529 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (210 aa)
TUT7Terminal uridylyl transferase 7. (1545 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (764 aa)
EIF4A1Eukaryotic translation initiation factor 4A1A; Belongs to the DEAD box helicase family. (407 aa)
LOC102359475Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (668 aa)
LOC102345373Uncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (553 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1640 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (639 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (534 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (286 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (727 aa)
TUT4Terminal uridylyl transferase 4. (1706 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2413 aa)
TUT1Terminal uridylyl transferase 1, U6 snRNA-specific. (845 aa)
CNOT10CCR4-NOT transcription complex subunit 10. (751 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (638 aa)
CNOT11CCR4-NOT transcription complex subunit 11. (445 aa)
H3B5X1_LATCHEukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (841 aa)
EIF4BEukaryotic translation initiation factor 4B. (651 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (299 aa)
EIF4A2Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family. (409 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1224 aa)
LRRC27Uncharacterized protein. (542 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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