STRINGSTRING
TTR TTR BCO1 BCO1 H2ZS43_LATCH H2ZS43_LATCH GPC1 GPC1 LRP1B LRP1B LOC102352186 LOC102352186 LRP12 LRP12 H2ZXK1_LATCH H2ZXK1_LATCH HSPG2 HSPG2 APOM APOM H3A5Z1_LATCH H3A5Z1_LATCH RBP7 RBP7 H3ABE1_LATCH H3ABE1_LATCH H3ACY2_LATCH H3ACY2_LATCH GPC2 GPC2 RBP1 RBP1 PYROXD2 PYROXD2 PLB1 PLB1 RBP2 RBP2 LOC102357927 LOC102357927 LRP3 LRP3 GPC6 GPC6 LOC102348686 LOC102348686 H3AY50_LATCH H3AY50_LATCH H3AZB0_LATCH H3AZB0_LATCH LOC102357889 LOC102357889 LOC102360472 LOC102360472 TTPAL TTPAL LOC102365063 LOC102365063 LOC102365332 LOC102365332 APOA4 APOA4 H3B4X5_LATCH H3B4X5_LATCH H3B5Q5_LATCH H3B5Q5_LATCH LOC102361871 LOC102361871 BCO2 BCO2 RBP4 RBP4 LRP10 LRP10 SDC3 SDC3 GPC3 GPC3 GPC4 GPC4 H3BFA3_LATCH H3BFA3_LATCH AGRN AGRN LRP1 LRP1 VKORC1L1 VKORC1L1 APOA1 APOA1 UBIAD1 UBIAD1 APOB APOB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (149 aa)
BCO1Beta-carotene oxygenase 1. (531 aa)
H2ZS43_LATCHDUF1943 domain-containing protein. (325 aa)
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (552 aa)
LRP1BUncharacterized protein. (1007 aa)
LOC102352186Vitellogenin domain-containing protein. (463 aa)
LRP12LDL receptor related protein 12. (534 aa)
H2ZXK1_LATCHUncharacterized protein. (547 aa)
HSPG2Heparan sulfate proteoglycan 2. (2595 aa)
APOMApolipoprotein M. (194 aa)
H3A5Z1_LATCHUncharacterized protein. (223 aa)
RBP7Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
H3ABE1_LATCHUncharacterized protein. (86 aa)
H3ACY2_LATCHUncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (134 aa)
GPC2Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (477 aa)
RBP1Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
PYROXD2Pyridine nucleotide-disulphide oxidoreductase domain 2. (583 aa)
PLB1Phospholipase B1. (967 aa)
RBP2Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
LOC102357927VKc domain-containing protein. (176 aa)
LRP3LDL receptor related protein 3. (692 aa)
GPC6Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (178 aa)
LOC102348686Uncharacterized protein. (591 aa)
H3AY50_LATCHRetinol saturase (all-trans-retinol 13,14-reductase). (515 aa)
H3AZB0_LATCHGlypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (263 aa)
LOC102357889Uncharacterized protein. (1826 aa)
LOC102360472Si:ch1073-13h15.3. (492 aa)
TTPALAlpha tocopherol transfer protein like. (340 aa)
LOC102365063Apolipoprotein A-IV b, tandem duplicate 2. (252 aa)
LOC102365332Apolipoprotein Ea. (278 aa)
APOA4Apolipoprotein A4. (367 aa)
H3B4X5_LATCHUncharacterized protein. (1753 aa)
H3B5Q5_LATCHLipase_GDSL domain-containing protein. (388 aa)
LOC102361871Uncharacterized protein. (1880 aa)
BCO2Beta-carotene oxygenase 2. (558 aa)
RBP4Retinol binding protein 4; Belongs to the calycin superfamily. Lipocalin family. (201 aa)
LRP10LDL receptor related protein 10. (543 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (416 aa)
GPC3Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (270 aa)
GPC4Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (433 aa)
H3BFA3_LATCHNtA domain-containing protein. (154 aa)
AGRNAgrin. (1882 aa)
LRP1LDL receptor related protein 1. (4329 aa)
VKORC1L1Vitamin K epoxide reductase complex subunit 1 like 1. (175 aa)
APOA1Uncharacterized protein. (237 aa)
UBIAD1UbiA prenyltransferase domain containing 1. (368 aa)
APOBApolipoprotein B. (4644 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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