STRINGSTRING
LOC102347893 LOC102347893 UBE2D2 UBE2D2 RNF181 RNF181 H2ZS39_LATCH H2ZS39_LATCH SHPRH SHPRH PEX5 PEX5 H2ZVL4_LATCH H2ZVL4_LATCH CDC73 CDC73 RNF152 RNF152 UBE2V2 UBE2V2 H2ZZP4_LATCH H2ZZP4_LATCH LOC102346166 LOC102346166 WAC WAC UBE2L6 UBE2L6 LOC102350907 LOC102350907 H3A2S8_LATCH H3A2S8_LATCH RTF1 RTF1 LEO1 LEO1 H3A427_LATCH H3A427_LATCH LOC102361505 LOC102361505 H3A5E7_LATCH H3A5E7_LATCH RNF20 RNF20 UBE2D1 UBE2D1 WDR61 WDR61 CINP CINP PCNA PCNA RNF144A RNF144A YIPF7 YIPF7 PEX13 PEX13 UBE2N UBE2N RPS27A RPS27A HLTF HLTF KXD1 KXD1 H3AK44_LATCH H3AK44_LATCH UBE2A UBE2A H2BE1 H2BE1 RNF40 RNF40 H3AS02_LATCH H3AS02_LATCH PAF1 PAF1 PEX14 PEX14 PEX10 PEX10 PEX5L PEX5L TMEM129 TMEM129 YIPF5 YIPF5 UBE2B UBE2B YIPF4 YIPF4 BCL10 BCL10 PEX12 PEX12 SELENOS SELENOS ZC2HC1C ZC2HC1C CTR9 CTR9 UBE2D3 UBE2D3 RAD18 RAD18 SLC39A13 SLC39A13 PRPF40B PRPF40B PEX2 PEX2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102347893UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
UBE2D2Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (146 aa)
RNF181Ring finger protein 181. (157 aa)
H2ZS39_LATCHHistone H2B; Belongs to the histone H2B family. (135 aa)
SHPRHSNF2 histone linker PHD RING helicase. (1577 aa)
PEX5Peroxisomal biogenesis factor 5. (666 aa)
H2ZVL4_LATCHHistone domain-containing protein; Belongs to the histone H2B family. (90 aa)
CDC73Cell division cycle 73. (316 aa)
RNF152Ring finger protein 152. (203 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (55 aa)
H2ZZP4_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
LOC102346166Ubiquitin-like domain-containing protein. (95 aa)
WACWW domain containing adaptor with coiled-coil. (643 aa)
UBE2L6UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (144 aa)
LOC102350907Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
H3A2S8_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (528 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (674 aa)
H3A427_LATCHHistone H2B; Belongs to the histone H2B family. (137 aa)
LOC102361505Histone H2B; Belongs to the histone H2B family. (126 aa)
H3A5E7_LATCHHistone H2B; Belongs to the histone H2B family. (130 aa)
RNF20E3 ubiquitin protein ligase. (1004 aa)
UBE2D1Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
WDR61WD_REPEATS_REGION domain-containing protein. (305 aa)
CINPCyclin dependent kinase 2 interacting protein. (212 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
RNF144ARBR-type E3 ubiquitin transferase. (303 aa)
YIPF7Protein YIPF. (256 aa)
PEX13SH3 domain-containing protein. (381 aa)
UBE2NUbiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
RPS27ARibosomal protein S27a. (156 aa)
HLTFHelicase like transcription factor. (1007 aa)
KXD1Ubiquitin-like domain-containing protein. (231 aa)
H3AK44_LATCHHistone domain-containing protein; Belongs to the histone H2B family. (105 aa)
UBE2AUbiquitin conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (122 aa)
RNF40E3 ubiquitin protein ligase. (838 aa)
H3AS02_LATCHUncharacterized protein. (291 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (530 aa)
PEX14Peroxisomal biogenesis factor 14. (317 aa)
PEX10Peroxisomal biogenesis factor 10. (315 aa)
PEX5LPeroxisomal biogenesis factor 5 like. (563 aa)
TMEM129Transmembrane protein 129. (367 aa)
YIPF5Protein YIPF. (276 aa)
UBE2BUbiquitin conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
YIPF4Protein YIPF. (242 aa)
BCL10BCL10 immune signaling adaptor. (232 aa)
PEX12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (356 aa)
SELENOSSelenoprotein S. (189 aa)
ZC2HC1CUncharacterized protein. (389 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1163 aa)
UBE2D3Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (118 aa)
RAD18RAD18 E3 ubiquitin protein ligase. (313 aa)
SLC39A13Solute carrier family 39 member 13. (312 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (894 aa)
PEX2Peroxisomal biogenesis factor 2. (299 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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