STRINGSTRING
RPS24 RPS24 LOC102356691 LOC102356691 RPS27L RPS27L RPL21 RPL21 RPS21 RPS21 UPF3B UPF3B CASC3 CASC3 RPS2 RPS2 RPL31 RPL31 RPL32 RPL32 RPL13 RPL13 RPS19 RPS19 H3B1J3_LATCH H3B1J3_LATCH DCP1A DCP1A NCBP1 NCBP1 LOC102352213 LOC102352213 PIH1D3 PIH1D3 H3B2F4_LATCH H3B2F4_LATCH RBM8A RBM8A RPL19 RPL19 RSAD1 RSAD1 H3B4H4_LATCH H3B4H4_LATCH H3B4N0_LATCH H3B4N0_LATCH LOC102348996 LOC102348996 RPL36 RPL36 H3B5R9_LATCH H3B5R9_LATCH RPL12 RPL12 RNPEPL1 RNPEPL1 RPS16 RPS16 RPS23 RPS23 H3B787_LATCH H3B787_LATCH SMG9 SMG9 H3B7R6_LATCH H3B7R6_LATCH RPS29 RPS29 UPF2 UPF2 RPS14 RPS14 PNRC2 PNRC2 RPS17 RPS17 RPL22 RPL22 RPL27A RPL27A RPL38 RPL38 H3BBR9_LATCH H3BBR9_LATCH RPS13 RPS13 RPS10 RPS10 RPL36AL RPL36AL H3BD67_LATCH H3BD67_LATCH NCBP2 NCBP2 RPS25 RPS25 PPP2R2A PPP2R2A H3BEF3_LATCH H3BEF3_LATCH RPL29-2 RPL29-2 RPL7A RPL7A RPL18A RPL18A ENSLACP00000020854 ENSLACP00000020854 LOC102360864 LOC102360864 RPLP0 RPLP0 RPL29 RPL29 RPL13A RPL13A RPL35 RPL35 LOC102345094 LOC102345094 RPS4X RPS4X RPSA RPSA SMG6-2 SMG6-2 PNRC1 PNRC1 PPP2R2B PPP2R2B RPL7 RPL7 H3A3N3_LATCH H3A3N3_LATCH RPS12 RPS12 RPL35A RPL35A RPS20 RPS20 RPL24 RPL24 ETF1 ETF1 H3A5G2_LATCH H3A5G2_LATCH LOC102359475 LOC102359475 LOC102348310 LOC102348310 H3A6F5_LATCH H3A6F5_LATCH H3A8L1_LATCH H3A8L1_LATCH RPL10 RPL10 PABPC1L PABPC1L H3AA47_LATCH H3AA47_LATCH H3AA59_LATCH H3AA59_LATCH RPL9 RPL9 RPLP2 RPLP2 RPL7L1 RPL7L1 RPS3 RPS3 H3ABM3_LATCH H3ABM3_LATCH RPL4 RPL4 RPL3 RPL3 LOC102364941 LOC102364941 RPS8 RPS8 SMG8 SMG8 UPF3A UPF3A LOC102350741 LOC102350741 RPL8 RPL8 RNPS1 RNPS1 RPL6 RPL6 LOC102359058 LOC102359058 RPS7 RPS7 RPL27 RPL27 RPL23A RPL23A RPS27 RPS27 H3AIG3_LATCH H3AIG3_LATCH UPF1 UPF1 SMG1 SMG1 RSRC1 RSRC1 RPL17 RPL17 RPL39 RPL39 RPL30 RPL30 RPS15 RPS15 LOC102360432 LOC102360432 RPS5 RPS5 RPS3A RPS3A RPS6 RPS6 RPL11 RPL11 SMG5 SMG5 ARL6IP1 ARL6IP1 RPL5 RPL5 RPS18 RPS18 RPS9 RPS9 RNPEP RNPEP RPS15A RPS15A RPL37A RPL37A RPL28 RPL28 PABPC4 PABPC4 RPS26 RPS26 MRNIP MRNIP SMG7 SMG7 SMG6 SMG6 H2ZTW7_LATCH H2ZTW7_LATCH ZGRF1 ZGRF1 H2ZRY3_LATCH H2ZRY3_LATCH EIF4A3 EIF4A3 LOC102359332 LOC102359332 H2ZVP1_LATCH H2ZVP1_LATCH H2ZWF4_LATCH H2ZWF4_LATCH GSPT1 GSPT1 RPS11 RPS11 RPL15 RPL15 H2ZYV3_LATCH H2ZYV3_LATCH LOC102353588 LOC102353588 RPL37 RPL37 RPL3L RPL3L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (178 aa)
LOC102356691Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
RPS27L40S ribosomal protein S27. (84 aa)
RPL21Ribosomal protein L21. (160 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (470 aa)
CASC3CASC3 exon junction complex subunit. (719 aa)
RPS2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (290 aa)
RPL31Ribosomal protein L31. (131 aa)
RPL32Ribosomal protein L32. (135 aa)
RPL13Ribosomal protein L13. (211 aa)
RPS19Ribosomal protein S19. (159 aa)
H3B1J3_LATCHUncharacterized protein. (511 aa)
DCP1ADecapping mRNA 1A. (597 aa)
NCBP1Nuclear cap binding protein subunit 1. (804 aa)
LOC102352213Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
PIH1D3PIH1 domain containing 3. (208 aa)
H3B2F4_LATCHUncharacterized protein. (106 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (452 aa)
H3B4H4_LATCHUncharacterized protein. (96 aa)
H3B4N0_LATCHUncharacterized protein. (135 aa)
LOC102348996Mago homolog, exon junction complex subunit. (148 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (119 aa)
H3B5R9_LATCHNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
RPL12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (185 aa)
RNPEPL1Arginyl aminopeptidase like 1. (703 aa)
RPS16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (202 aa)
RPS23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
H3B787_LATCHRibosomal_L14e domain-containing protein. (141 aa)
SMG9SMG9 nonsense mediated mRNA decay factor. (519 aa)
H3B7R6_LATCHRibosomal_S4e domain-containing protein. (153 aa)
RPS29Ribosomal protein S29. (56 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1273 aa)
RPS14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (163 aa)
PNRC2Proline rich nuclear receptor coactivator 2. (143 aa)
RPS17Ribosomal protein S17. (162 aa)
RPL22Uncharacterized protein. (124 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
RPL38Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (79 aa)
H3BBR9_LATCHRibosomal_S13_N domain-containing protein. (152 aa)
RPS13Ribosomal protein S13. (151 aa)
RPS10Ribosomal protein S10. (176 aa)
RPL36ALRibosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
H3BD67_LATCHRibosomal_L19e domain-containing protein. (109 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
PPP2R2ASerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (451 aa)
H3BEF3_LATCHUncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (82 aa)
RPL29-260S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (68 aa)
RPL7ARibosomal protein L7a. (277 aa)
RPL18A60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
ENSLACP00000020854Large subunit ribosomal protein L22e. (88 aa)
LOC102360864Ribosomal protein L26. (145 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
RPL2960S ribosomal protein L29-like. (64 aa)
RPL13ARibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (208 aa)
RPL35Ribosomal protein L35. (123 aa)
LOC10234509440S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (313 aa)
SMG6-2PINc domain-containing protein. (465 aa)
PNRC1Proline rich nuclear receptor coactivator 1. (278 aa)
PPP2R2BSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (432 aa)
RPL7Ribosomal protein L7. (230 aa)
H3A3N3_LATCHUncharacterized protein. (134 aa)
RPS1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
RPL35ARibosomal protein L35a. (110 aa)
RPS20Ribosomal_S10 domain-containing protein. (119 aa)
RPL24Ribosomal protein L24. (173 aa)
ETF1Eukaryotic translation termination factor 1. (437 aa)
H3A5G2_LATCHRibosomal protein S14. (149 aa)
LOC102359475Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (668 aa)
LOC102348310Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (141 aa)
H3A6F5_LATCHUncharacterized protein. (168 aa)
H3A8L1_LATCHUncharacterized protein. (119 aa)
RPL10Ribosomal protein L10. (215 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (639 aa)
H3AA47_LATCHRibosomal_L18_c domain-containing protein. (271 aa)
H3AA59_LATCHRibosomal_L2_C domain-containing protein. (260 aa)
RPL9Ribosomal protein L9. (194 aa)
RPLP2Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
RPL7L1Ribosomal protein L7 like 1. (189 aa)
RPS3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (254 aa)
H3ABM3_LATCH60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (166 aa)
RPL4Ribosomal protein L4. (360 aa)
RPL3Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (406 aa)
LOC102364941Ribosomal protein L34. (118 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (209 aa)
SMG8SMG8 nonsense mediated mRNA decay factor. (913 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (332 aa)
LOC102350741Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
RPL8Ribosomal_L2_C domain-containing protein. (257 aa)
RNPS1RNA binding protein with serine rich domain 1. (284 aa)
RPL6Ribosomal_L6e_N domain-containing protein. (263 aa)
LOC102359058KOW domain-containing protein. (145 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (198 aa)
RPL2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
RPL23ARibosomal protein L23a. (153 aa)
RPS2740S ribosomal protein S27. (84 aa)
H3AIG3_LATCH40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (88 aa)
UPF1UPF1 RNA helicase and ATPase. (697 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3451 aa)
RSRC1Arginine and serine rich coiled-coil 1. (320 aa)
RPL17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
RPL39Ribosomal protein L39. (51 aa)
RPL30Ribosomal protein L30. (115 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (151 aa)
LOC102360432Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
RPS5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
RPL11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (184 aa)
SMG5SMG5 nonsense mediated mRNA decay factor. (1046 aa)
ARL6IP1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
RPL5Ribosomal protein L5. (296 aa)
RPS18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (128 aa)
RPS9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (139 aa)
RNPEPArginyl aminopeptidase. (624 aa)
RPS15AUncharacterized protein. (106 aa)
RPL37ARibosomal protein L37a. (92 aa)
RPL28Ribosomal protein L28. (107 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (638 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
MRNIPUncharacterized protein. (391 aa)
SMG7SMG7 nonsense mediated mRNA decay factor. (1197 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (803 aa)
H2ZTW7_LATCHUncharacterized protein. (183 aa)
ZGRF1Uncharacterized protein. (555 aa)
H2ZRY3_LATCHUncharacterized protein. (99 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
LOC102359332Uncharacterized protein. (179 aa)
H2ZVP1_LATCHUncharacterized protein. (133 aa)
H2ZWF4_LATCHRibosomal_L6e_N domain-containing protein. (254 aa)
GSPT1G1 to S phase transition 1. (504 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
H2ZYV3_LATCHUncharacterized protein. (204 aa)
LOC102353588KOW domain-containing protein. (145 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (96 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (407 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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