(12 nodes) Aminotransferase class-V network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGXT	Serine--pyruvate aminotransferase. (426 aa)
	SCLY	Selenocysteine lyase. (381 aa)
	MOCOS	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. (800 aa)
	SGPL1	Sphingosine-1-phosphate lyase 1. (566 aa)
	CSAD	Uncharacterized protein. (491 aa)
	KYNU	Kynureninase. (278 aa)
	ALAS1	5-aminolevulinate synthase. (642 aa)
	H2ZS89_LATCH	Uncharacterized protein. (189 aa)
	GCAT	Glycine C-acetyltransferase. (311 aa)
	LOC102360660	Aminotran_5 domain-containing protein. (368 aa)
	LOC102346076	Aminotran_5 domain-containing protein. (349 aa)
	LOC102345272	Phosphoserine aminotransferase. (368 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGXT	ALAS1	ENSLACP00000007350	ENSLACP00000021401	Serine--pyruvate aminotransferase.	5-aminolevulinate synthase.	0.924
AGXT	GCAT	ENSLACP00000007350	ENSLACP00000000288	Serine--pyruvate aminotransferase.	Glycine C-acetyltransferase.	0.943
AGXT	LOC102345272	ENSLACP00000007350	ENSLACP00000005032	Serine--pyruvate aminotransferase.	Phosphoserine aminotransferase.	0.446
AGXT	LOC102346076	ENSLACP00000007350	ENSLACP00000002048	Serine--pyruvate aminotransferase.	Aminotran_5 domain-containing protein.	0.446
AGXT	LOC102360660	ENSLACP00000007350	ENSLACP00000001933	Serine--pyruvate aminotransferase.	Aminotran_5 domain-containing protein.	0.446
AGXT	SGPL1	ENSLACP00000007350	ENSLACP00000013874	Serine--pyruvate aminotransferase.	Sphingosine-1-phosphate lyase 1.	0.410
ALAS1	AGXT	ENSLACP00000021401	ENSLACP00000007350	5-aminolevulinate synthase.	Serine--pyruvate aminotransferase.	0.924
ALAS1	GCAT	ENSLACP00000021401	ENSLACP00000000288	5-aminolevulinate synthase.	Glycine C-acetyltransferase.	0.908
GCAT	AGXT	ENSLACP00000000288	ENSLACP00000007350	Glycine C-acetyltransferase.	Serine--pyruvate aminotransferase.	0.943
GCAT	ALAS1	ENSLACP00000000288	ENSLACP00000021401	Glycine C-acetyltransferase.	5-aminolevulinate synthase.	0.908
H2ZS89_LATCH	LOC102345272	ENSLACP00000000260	ENSLACP00000005032	Uncharacterized protein.	Phosphoserine aminotransferase.	0.414
H2ZS89_LATCH	LOC102346076	ENSLACP00000000260	ENSLACP00000002048	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.414
H2ZS89_LATCH	LOC102360660	ENSLACP00000000260	ENSLACP00000001933	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.414
H2ZS89_LATCH	MOCOS	ENSLACP00000000260	ENSLACP00000013304	Uncharacterized protein.	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	0.682
H2ZS89_LATCH	SCLY	ENSLACP00000000260	ENSLACP00000011431	Uncharacterized protein.	Selenocysteine lyase.	0.400
LOC102345272	AGXT	ENSLACP00000005032	ENSLACP00000007350	Phosphoserine aminotransferase.	Serine--pyruvate aminotransferase.	0.446
LOC102345272	H2ZS89_LATCH	ENSLACP00000005032	ENSLACP00000000260	Phosphoserine aminotransferase.	Uncharacterized protein.	0.414
LOC102345272	LOC102346076	ENSLACP00000005032	ENSLACP00000002048	Phosphoserine aminotransferase.	Aminotran_5 domain-containing protein.	0.901
LOC102345272	LOC102360660	ENSLACP00000005032	ENSLACP00000001933	Phosphoserine aminotransferase.	Aminotran_5 domain-containing protein.	0.901
LOC102346076	AGXT	ENSLACP00000002048	ENSLACP00000007350	Aminotran_5 domain-containing protein.	Serine--pyruvate aminotransferase.	0.446