(10 nodes) Rel homology DNA-binding domain network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102354410	RHD domain-containing protein. (185 aa)
	NFATC3	Nuclear factor of activated T cells 3. (1027 aa)
	NFATC1	Nuclear factor of activated T cells 1. (455 aa)
	NFKB1	Nuclear factor kappa B subunit 1. (969 aa)
	NFAT5	Nuclear factor of activated T cells 5. (1531 aa)
	H3AHH6_LATCH	RHD domain-containing protein. (288 aa)
	REL	REL proto-oncogene, NF-kB subunit. (593 aa)
	H3B111_LATCH	V-rel avian reticuloendotheliosis viral oncogene homolog A. (203 aa)
	NFKB2	Nuclear factor kappa B subunit 2. (914 aa)
	NFATC2	Nuclear factor of activated T cells 2. (912 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3B111_LATCH	NFKB1	ENSLACP00000015582	ENSLACP00000003071	V-rel avian reticuloendotheliosis viral oncogene homolog A.	Nuclear factor kappa B subunit 1.	0.842
H3B111_LATCH	NFKB2	ENSLACP00000015582	ENSLACP00000018524	V-rel avian reticuloendotheliosis viral oncogene homolog A.	Nuclear factor kappa B subunit 2.	0.842
LOC102354410	NFATC1	ENSLACP00000000625	ENSLACP00000001999	RHD domain-containing protein.	Nuclear factor of activated T cells 1.	0.900
LOC102354410	NFATC2	ENSLACP00000000625	ENSLACP00000022961	RHD domain-containing protein.	Nuclear factor of activated T cells 2.	0.661
LOC102354410	NFATC3	ENSLACP00000000625	ENSLACP00000001488	RHD domain-containing protein.	Nuclear factor of activated T cells 3.	0.536
NFATC1	LOC102354410	ENSLACP00000001999	ENSLACP00000000625	Nuclear factor of activated T cells 1.	RHD domain-containing protein.	0.900
NFATC1	NFATC2	ENSLACP00000001999	ENSLACP00000022961	Nuclear factor of activated T cells 1.	Nuclear factor of activated T cells 2.	0.659
NFATC1	NFATC3	ENSLACP00000001999	ENSLACP00000001488	Nuclear factor of activated T cells 1.	Nuclear factor of activated T cells 3.	0.564
NFATC2	LOC102354410	ENSLACP00000022961	ENSLACP00000000625	Nuclear factor of activated T cells 2.	RHD domain-containing protein.	0.661
NFATC2	NFATC1	ENSLACP00000022961	ENSLACP00000001999	Nuclear factor of activated T cells 2.	Nuclear factor of activated T cells 1.	0.659
NFATC2	NFATC3	ENSLACP00000022961	ENSLACP00000001488	Nuclear factor of activated T cells 2.	Nuclear factor of activated T cells 3.	0.643
NFATC3	LOC102354410	ENSLACP00000001488	ENSLACP00000000625	Nuclear factor of activated T cells 3.	RHD domain-containing protein.	0.536
NFATC3	NFATC1	ENSLACP00000001488	ENSLACP00000001999	Nuclear factor of activated T cells 3.	Nuclear factor of activated T cells 1.	0.564
NFATC3	NFATC2	ENSLACP00000001488	ENSLACP00000022961	Nuclear factor of activated T cells 3.	Nuclear factor of activated T cells 2.	0.643
NFKB1	H3B111_LATCH	ENSLACP00000003071	ENSLACP00000015582	Nuclear factor kappa B subunit 1.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.842
NFKB1	REL	ENSLACP00000003071	ENSLACP00000009688	Nuclear factor kappa B subunit 1.	REL proto-oncogene, NF-kB subunit.	0.842
NFKB2	H3B111_LATCH	ENSLACP00000018524	ENSLACP00000015582	Nuclear factor kappa B subunit 2.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.842
NFKB2	REL	ENSLACP00000018524	ENSLACP00000009688	Nuclear factor kappa B subunit 2.	REL proto-oncogene, NF-kB subunit.	0.851
REL	NFKB1	ENSLACP00000009688	ENSLACP00000003071	REL proto-oncogene, NF-kB subunit.	Nuclear factor kappa B subunit 1.	0.842
REL	NFKB2	ENSLACP00000009688	ENSLACP00000018524	REL proto-oncogene, NF-kB subunit.	Nuclear factor kappa B subunit 2.	0.851