STRINGSTRING
PAX2 PAX2 SOX3 SOX3 SOX2 SOX2 CASP3 CASP3 PHOX2B PHOX2B MYO7A MYO7A BMP4 BMP4 BMP7 BMP7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PAX2Paired box 2. (456 aa)
SOX3SRY-box transcription factor 3. (304 aa)
SOX2SRY-box transcription factor 2. (315 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (290 aa)
PHOX2BPaired like homeobox 2B. (287 aa)
MYO7AMyosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2185 aa)
BMP4Bone morphogenetic protein 4. (460 aa)
BMP7Bone morphogenetic protein 7. (425 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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