STRINGSTRING
CDON CDON LAMC1 LAMC1 GLI3 GLI3 IHH IHH OLIG2 OLIG2 H3AFZ6_LATCH H3AFZ6_LATCH HNMT HNMT FRAS1 FRAS1 MYH6 MYH6 EFEMP2 EFEMP2 PTCH2 PTCH2 HHIP HHIP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDONCell adhesion associated, oncogene regulated. (1293 aa)
LAMC1Laminin subunit gamma 1. (1472 aa)
GLI3GLI family zinc finger 3. (1456 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (410 aa)
OLIG2Oligodendrocyte transcription factor 2. (273 aa)
H3AFZ6_LATCHFraser extracellular matrix complex subunit 1. (1615 aa)
HNMTHistamine N-methyltransferase. (292 aa)
FRAS1Uncharacterized protein. (630 aa)
MYH6Myosin heavy chain 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1936 aa)
EFEMP2EGF containing fibulin extracellular matrix protein 2. (446 aa)
PTCH2Patched 2. (1134 aa)
HHIPHedgehog interacting protein. (687 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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