STRINGSTRING
TBR1 TBR1 LOC102356288 LOC102356288 SYP SYP TPI1 TPI1 GAPDHS GAPDHS PYGB PYGB CKMT2 CKMT2 SYT1 SYT1 CKB CKB GAPDH GAPDH CKMT1A CKMT1A CKM CKM MYOG MYOG LOC102353631-2 LOC102353631-2 LOC102360389 LOC102360389 SAMHD1 SAMHD1 H3BGQ4_LATCH H3BGQ4_LATCH LUM LUM LOC102346010 LOC102346010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TBR1T-box brain transcription factor 1. (673 aa)
LOC102356288Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)
SYPSynaptophysin. (308 aa)
TPI1Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis. (262 aa)
GAPDHSGlyceraldehyde-3-phosphate dehydrogenase. (396 aa)
PYGBAlpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (267 aa)
CKMT2Creatine kinase, mitochondrial 2; Belongs to the ATP:guanido phosphotransferase family. (419 aa)
SYT1Synaptotagmin 1. (384 aa)
CKBCreatine kinase B; Belongs to the ATP:guanido phosphotransferase family. (389 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (359 aa)
CKMT1ACreatine kinase, mitochondrial 1; Belongs to the ATP:guanido phosphotransferase family. (418 aa)
CKMCreatine kinase, M-type; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
MYOGMyogenin. (242 aa)
LOC102353631-2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (472 aa)
LOC102360389Tr-type G domain-containing protein. (413 aa)
SAMHD1Uncharacterized protein. (621 aa)
H3BGQ4_LATCHC2 domain-containing protein. (310 aa)
LUMLumican. (345 aa)
LOC102346010Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (465 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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