STRINGSTRING
LOC102367553 LOC102367553 H3F3B H3F3B H2ZS39_LATCH H2ZS39_LATCH H3F3B-2 H3F3B-2 PRDX1 PRDX1 SEPTIN2 SEPTIN2 SDF4 SDF4 H2BE1 H2BE1 H3AK44_LATCH H3AK44_LATCH LOC102355712 LOC102355712 HPX HPX H3A5E7_LATCH H3A5E7_LATCH LOC102361505 LOC102361505 H3A427_LATCH H3A427_LATCH H3A2S8_LATCH H3A2S8_LATCH H2ZZP4_LATCH H2ZZP4_LATCH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102367553Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family. (646 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
H2ZS39_LATCHHistone H2B; Belongs to the histone H2B family. (135 aa)
H3F3B-2Histone H3; Belongs to the histone H3 family. (136 aa)
PRDX1Peroxiredoxin 1. (127 aa)
SEPTIN2Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (350 aa)
SDF4Stromal cell derived factor 4. (357 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (122 aa)
H3AK44_LATCHHistone domain-containing protein; Belongs to the histone H2B family. (105 aa)
LOC102355712Histone H3; Belongs to the histone H3 family. (129 aa)
HPXUncharacterized protein. (228 aa)
H3A5E7_LATCHHistone H2B; Belongs to the histone H2B family. (130 aa)
LOC102361505Histone H2B; Belongs to the histone H2B family. (126 aa)
H3A427_LATCHHistone H2B; Belongs to the histone H2B family. (137 aa)
H3A2S8_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
H2ZZP4_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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