STRINGSTRING
ATP5F1A ATP5F1A KRT18 KRT18 LOC102353631-2 LOC102353631-2 H3F3B-2 H3F3B-2 PDIA3 PDIA3 H2BE1 H2BE1 H3AK44_LATCH H3AK44_LATCH LOC102355712 LOC102355712 PLEC PLEC NAA10 NAA10 LOC102351334 LOC102351334 H3A5E7_LATCH H3A5E7_LATCH LOC102361505 LOC102361505 H3A427_LATCH H3A427_LATCH H3A2S8_LATCH H3A2S8_LATCH H2ZZP4_LATCH H2ZZP4_LATCH LOC102347712 LOC102347712 LOC102367553 LOC102367553 HSPA8 HSPA8 H3F3B H3F3B H2ZS39_LATCH H2ZS39_LATCH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATP5F1AATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (553 aa)
KRT18Keratin 18b; Belongs to the intermediate filament family. (447 aa)
LOC102353631-2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (472 aa)
H3F3B-2Histone H3; Belongs to the histone H3 family. (136 aa)
PDIA3Protein disulfide-isomerase. (497 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (122 aa)
H3AK44_LATCHHistone domain-containing protein; Belongs to the histone H2B family. (105 aa)
LOC102355712Histone H3; Belongs to the histone H3 family. (129 aa)
PLECPlectin b. (4509 aa)
NAA10N(alpha)-acetyltransferase 10, NatA catalytic subunit. (211 aa)
LOC102351334Scinderin like a. (721 aa)
H3A5E7_LATCHHistone H2B; Belongs to the histone H2B family. (130 aa)
LOC102361505Histone H2B; Belongs to the histone H2B family. (126 aa)
H3A427_LATCHHistone H2B; Belongs to the histone H2B family. (137 aa)
H3A2S8_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
H2ZZP4_LATCHHistone H2B; Belongs to the histone H2B family. (138 aa)
LOC102347712Thioredoxin; Belongs to the thioredoxin family. (105 aa)
LOC102367553Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family. (646 aa)
HSPA8Uncharacterized protein; Belongs to the heat shock protein 70 family. (645 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
H2ZS39_LATCHHistone H2B; Belongs to the histone H2B family. (135 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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