STRINGSTRING
HOXA13 HOXA13 HOXA10 HOXA10 HOXA2 HOXA2 RARS1 RARS1 AR AR FGF7 FGF7 LOC102357987 LOC102357987 SHH SHH HOXD12 HOXD12 HOXD11 HOXD11 WNT3 WNT3 FGF8 FGF8 PTCH1 PTCH1 NOTCH1 NOTCH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HOXA13Homeobox A13b. (295 aa)
HOXA10Homeobox A10. (557 aa)
HOXA2Homeobox A2b. (366 aa)
RARS1Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (660 aa)
ARAndrogen receptor. (412 aa)
FGF7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
LOC102357987Uncharacterized protein. (2519 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (421 aa)
HOXD12Homeobox D12. (268 aa)
HOXD11Homeobox D11. (294 aa)
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (331 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
PTCH1Patched 1. (1287 aa)
NOTCH1Notch receptor 1. (2494 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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