STRINGSTRING
WNT6 WNT6 TGFB3 TGFB3 EFNA5 EFNA5 SEMA3A SEMA3A PAX7 PAX7 SOX9 SOX9 TBX5 TBX5 PDGFB PDGFB PITX1 PITX1 GDNF GDNF PAX3 PAX3 EPHA4 EPHA4 TGFB2 TGFB2 CXCL12 CXCL12 TGFB1 TGFB1 CXCR4 CXCR4 LOC102352268 LOC102352268
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WNT6Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (348 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
EFNA5Ephrin A5; Belongs to the ephrin family. (185 aa)
SEMA3ASemaphorin 3A; Belongs to the semaphorin family. (635 aa)
PAX7Paired box 7. (420 aa)
SOX9SRY-box transcription factor 9. (475 aa)
TBX5T-box transcription factor 5. (522 aa)
PDGFBPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (209 aa)
PITX1Homeobox protein. (305 aa)
GDNFGlial cell derived neurotrophic factor. (222 aa)
PAX3Paired box 3. (488 aa)
EPHA4EPH receptor A4. (985 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
CXCL12C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (95 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
CXCR4C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (363 aa)
LOC102352268Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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