STRINGSTRING
ZMIZ1 ZMIZ1 TMX3 TMX3 BFSP2 BFSP2 SOX2 SOX2 RPGRIP1L RPGRIP1L SOX4 SOX4 TCF7L1 TCF7L1 DENND4B DENND4B LOC102358266 LOC102358266 LRP6 LRP6 ALX3 ALX3 SGPP1 SGPP1 MSX2 MSX2 LOC102347432 LOC102347432 RPGR RPGR PAX6 PAX6 MEIS2 MEIS2 OPN5 OPN5 FGFR1 FGFR1 RHO RHO PXDN PXDN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZMIZ1Zinc finger MIZ-type containing 1. (968 aa)
TMX3Thioredoxin related transmembrane protein 3. (458 aa)
BFSP2Beaded filament structural protein 2; Belongs to the intermediate filament family. (422 aa)
SOX2SRY-box transcription factor 2. (315 aa)
RPGRIP1LRPGRIP1 like. (1318 aa)
SOX4Transcription factor SOX. (385 aa)
TCF7L1Transcription factor 7 like 1. (438 aa)
DENND4BDENN domain containing 4B. (1450 aa)
LOC102358266Dickkopf WNT signaling pathway inhibitor 1b. (261 aa)
LRP6Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1615 aa)
ALX3ALX homeobox 3. (257 aa)
SGPP1Sphingosine-1-phosphate phosphatase 1. (441 aa)
MSX2Msh homeobox 2. (254 aa)
LOC102347432Rhodopsin. (355 aa)
RPGRRetinitis pigmentosa GTPase regulator. (1152 aa)
PAX6Paired box 6. (463 aa)
MEIS2Meis homeobox 2. (477 aa)
OPN5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (290 aa)
FGFR1Fibroblast growth factor receptor. (824 aa)
RHORhodopsin. (355 aa)
PXDNPeroxidasin. (1149 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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