STRINGSTRING
H3ALV1_LATCH H3ALV1_LATCH ND5 ND5 PMEL PMEL CALR3 CALR3 VIM VIM CSF1R CSF1R LOC102360381 LOC102360381 MYCBP2 MYCBP2 LOC102347143 LOC102347143 GLIS2 GLIS2 SOX10 SOX10 DSP DSP ITGA6 ITGA6 SLC24A5 SLC24A5 FGG FGG PAX3 PAX3 FGB FGB LOC102347040 LOC102347040 HPX HPX TIMMDC1 TIMMDC1 MITF MITF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3ALV1_LATCHUncharacterized protein. (375 aa)
ND5NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (611 aa)
PMELPremelanosome protein. (766 aa)
CALR3Calreticulin. (416 aa)
VIMVimentin; Belongs to the intermediate filament family. (522 aa)
CSF1RColony stimulating factor 1 receptor. (968 aa)
LOC102360381Uncharacterized protein. (300 aa)
MYCBP2MYC binding protein 2. (5051 aa)
LOC102347143Uncharacterized protein. (612 aa)
GLIS2GLIS family zinc finger 2. (534 aa)
SOX10SRY-box transcription factor 10. (451 aa)
DSPDesmoplakin. (2623 aa)
ITGA6Integrin subunit alpha 6; Belongs to the integrin alpha chain family. (1077 aa)
SLC24A5Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (572 aa)
FGGFibrinogen gamma chain. (376 aa)
PAX3Paired box 3. (488 aa)
FGBFibrinogen beta chain. (454 aa)
LOC102347040Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
HPXUncharacterized protein. (228 aa)
TIMMDC1Translocase of inner mitochondrial membrane domain containing 1. (299 aa)
MITFMelanocyte inducing transcription factor. (486 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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