STRINGSTRING
NOTCH1 NOTCH1 LOC102352268 LOC102352268 WNT9A WNT9A TGFB3 TGFB3 LIN28A LIN28A LOC102357987 LOC102357987 GDF5 GDF5 TGFB2 TGFB2 ACAN ACAN KRAS KRAS SOX9 SOX9 TGFB1 TGFB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOTCH1Notch receptor 1. (2494 aa)
LOC102352268Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
WNT9AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (341 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LIN28ALin-28 homolog A. (205 aa)
LOC102357987Uncharacterized protein. (2519 aa)
GDF5Growth differentiation factor 5. (501 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
ACANAggrecan. (1860 aa)
KRASKRAS proto-oncogene, GTPase. (189 aa)
SOX9SRY-box transcription factor 9. (475 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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