STRINGSTRING
TNFRSF9 TNFRSF9 TNFSF11 TNFSF11 CNGB1 CNGB1 TNFRSF11B TNFRSF11B RAG1 RAG1 EDAR EDAR GPR183 GPR183 TNFSF12 TNFSF12 TNFRSF1B TNFRSF1B LOC102353750 LOC102353750 TNFRSF25 TNFRSF25 CXCR5 CXCR5 SHARPIN SHARPIN LOC102356355 LOC102356355
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TNFRSF9TNF receptor superfamily member 9. (213 aa)
TNFSF11TNF superfamily member 11; Belongs to the tumor necrosis factor family. (169 aa)
CNGB1Cyclic nucleotide gated channel subunit beta 1. (726 aa)
TNFRSF11BTNF receptor superfamily member 11b. (409 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1045 aa)
EDAREctodysplasin A receptor. (454 aa)
GPR183G protein-coupled receptor 183; Belongs to the G-protein coupled receptor 1 family. (363 aa)
TNFSF12TNF superfamily member 12; Belongs to the tumor necrosis factor family. (246 aa)
TNFRSF1BTNF receptor superfamily member 1B. (465 aa)
LOC102353750TNFR-Cys domain-containing protein. (202 aa)
TNFRSF25TNF receptor superfamily member 25. (384 aa)
CXCR5C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. (373 aa)
SHARPINUncharacterized protein. (681 aa)
LOC102356355TNFR-Cys domain-containing protein. (163 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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