STRINGSTRING
MECP2 MECP2 H3F3B H3F3B ASXL1 ASXL1 SOX4 SOX4 SMARCD1 SMARCD1 KDM6A KDM6A BRD4 BRD4 HDAC4 HDAC4 LOC102355712 LOC102355712 ARID1A ARID1A KMT2C KMT2C DOT1L DOT1L SMARCB1 SMARCB1 HDAC3 HDAC3 EZH2 EZH2 ATRX ATRX ANKRD11 ANKRD11 SMC3 SMC3 SMARCE1 SMARCE1 H3F3B-2 H3F3B-2 RAD21 RAD21 TASP1 TASP1 HDAC5 HDAC5 PHF6 PHF6 SMARCC2 SMARCC2 KMT2A KMT2A WDR5B WDR5B H3BI95_LATCH H3BI95_LATCH HDAC7 HDAC7 ARID1B ARID1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MECP2Methyl-CpG binding protein 2. (459 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
ASXL1ASXL transcriptional regulator 1. (1490 aa)
SOX4Transcription factor SOX. (385 aa)
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (476 aa)
KDM6ALysine (K)-specific demethylase 6A. (1452 aa)
BRD4Uncharacterized protein. (1284 aa)
HDAC4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1086 aa)
LOC102355712Histone H3; Belongs to the histone H3 family. (129 aa)
ARID1AAT-rich interaction domain 1A. (1861 aa)
KMT2CLysine methyltransferase 2C. (4872 aa)
DOT1LHistone-lysine N-methyltransferase, H3 lysine-79 specific. (988 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (384 aa)
HDAC3Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (428 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (750 aa)
ATRXATRX chromatin remodeler. (2488 aa)
ANKRD11Ankyrin repeat domain 11. (2717 aa)
SMC3Structural maintenance of chromosomes protein. (1222 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (414 aa)
H3F3B-2Histone H3; Belongs to the histone H3 family. (136 aa)
RAD21RAD21 cohesin complex component. (630 aa)
TASP1Taspase 1. (301 aa)
HDAC5Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1084 aa)
PHF6PHD finger protein 6. (366 aa)
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2. (1212 aa)
KMT2AHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3815 aa)
WDR5BWD repeat domain 5B. (334 aa)
H3BI95_LATCHLysine (K)-specific methyltransferase 2D. (2169 aa)
HDAC7Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (873 aa)
ARID1BAT-rich interaction domain 1B. (1533 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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