(9 nodes) (2022) Expression characteristics and interaction networks of microRNAs in spleen tissues of grass carp (Ctenopharyngodon idella). network (Latimeria chalumnae)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WT1	WT1 transcription factor. (422 aa)
	LAMA3	Laminin subunit alpha 3. (3364 aa)
	H3B8U3_LATCH	Serine/threonine-protein kinase TOR. (1418 aa)
	LOC102359774	Uncharacterized protein. (218 aa)
	RASGRF2	Ras protein specific guanine nucleotide releasing factor 2. (1168 aa)
	TLX1	T cell leukemia homeobox 1. (311 aa)
	DDIT4	DNA damage inducible transcript 4. (222 aa)
	NFKBIA	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (298 aa)
	MTOR	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (1009 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDIT4	LAMA3	ENSLACP00000019932	ENSLACP00000018556	DNA damage inducible transcript 4.	Laminin subunit alpha 3.	0.489
DDIT4	NFKBIA	ENSLACP00000019932	ENSLACP00000020134	DNA damage inducible transcript 4.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.562
DDIT4	RASGRF2	ENSLACP00000019932	ENSLACP00000011912	DNA damage inducible transcript 4.	Ras protein specific guanine nucleotide releasing factor 2.	0.627
H3B8U3_LATCH	MTOR	ENSLACP00000018314	ENSLACP00000018843	Serine/threonine-protein kinase TOR.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.944
LAMA3	DDIT4	ENSLACP00000018556	ENSLACP00000019932	Laminin subunit alpha 3.	DNA damage inducible transcript 4.	0.489
LAMA3	LOC102359774	ENSLACP00000018556	ENSLACP00000017377	Laminin subunit alpha 3.	Uncharacterized protein.	0.465
LAMA3	NFKBIA	ENSLACP00000018556	ENSLACP00000020134	Laminin subunit alpha 3.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.501
LAMA3	RASGRF2	ENSLACP00000018556	ENSLACP00000011912	Laminin subunit alpha 3.	Ras protein specific guanine nucleotide releasing factor 2.	0.711
LOC102359774	LAMA3	ENSLACP00000017377	ENSLACP00000018556	Uncharacterized protein.	Laminin subunit alpha 3.	0.465
LOC102359774	NFKBIA	ENSLACP00000017377	ENSLACP00000020134	Uncharacterized protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.603
LOC102359774	RASGRF2	ENSLACP00000017377	ENSLACP00000011912	Uncharacterized protein.	Ras protein specific guanine nucleotide releasing factor 2.	0.575
MTOR	H3B8U3_LATCH	ENSLACP00000018843	ENSLACP00000018314	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Serine/threonine-protein kinase TOR.	0.944
NFKBIA	DDIT4	ENSLACP00000020134	ENSLACP00000019932	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	DNA damage inducible transcript 4.	0.562
NFKBIA	LAMA3	ENSLACP00000020134	ENSLACP00000018556	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	Laminin subunit alpha 3.	0.501
NFKBIA	LOC102359774	ENSLACP00000020134	ENSLACP00000017377	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	Uncharacterized protein.	0.603
NFKBIA	RASGRF2	ENSLACP00000020134	ENSLACP00000011912	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	Ras protein specific guanine nucleotide releasing factor 2.	0.597
RASGRF2	DDIT4	ENSLACP00000011912	ENSLACP00000019932	Ras protein specific guanine nucleotide releasing factor 2.	DNA damage inducible transcript 4.	0.627
RASGRF2	LAMA3	ENSLACP00000011912	ENSLACP00000018556	Ras protein specific guanine nucleotide releasing factor 2.	Laminin subunit alpha 3.	0.711
RASGRF2	LOC102359774	ENSLACP00000011912	ENSLACP00000017377	Ras protein specific guanine nucleotide releasing factor 2.	Uncharacterized protein.	0.575
RASGRF2	NFKBIA	ENSLACP00000011912	ENSLACP00000020134	Ras protein specific guanine nucleotide releasing factor 2.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.597