STRINGSTRING
COL1A1 COL1A1 BMP6 BMP6 BMP2 BMP2 LOC102361854 LOC102361854 TGFB1 TGFB1 SOX9 SOX9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL1A1Collagen type I alpha 1 chain. (1486 aa)
BMP6Bone morphogenetic protein 6. (428 aa)
BMP2Bone morphogenetic protein 2. (402 aa)
LOC102361854Anti-dorsalizing morphogenic protein. (394 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
SOX9SRY-box transcription factor 9. (475 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (36%) [HD]