STRINGSTRING
LOC102346010 LOC102346010 APOB APOB C1S C1S LRP2 LRP2 CYTB CYTB LRP6 LRP6 BMP1 BMP1 LOC102360389 LOC102360389 LOC102353631-2 LOC102353631-2 LRP3 LRP3 PUM3 PUM3 SMAD2 SMAD2 SUSD1 SUSD1 LOC102356288 LOC102356288 C1R C1R RCHY1 RCHY1 LRP8 LRP8 LRP12 LRP12 LRP1B LRP1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102346010Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (465 aa)
APOBApolipoprotein B. (4644 aa)
C1SComplement C1s; Belongs to the peptidase S1 family. (682 aa)
LRP2LDL receptor related protein 2. (4649 aa)
CYTBCytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. (380 aa)
LRP6Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1615 aa)
BMP1Metalloendopeptidase. (978 aa)
LOC102360389Tr-type G domain-containing protein. (413 aa)
LOC102353631-2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (472 aa)
LRP3LDL receptor related protein 3. (692 aa)
PUM3Pumilio RNA binding family member 3. (641 aa)
SMAD2Mothers against decapentaplegic homolog. (467 aa)
SUSD1Sushi domain containing 1. (707 aa)
LOC102356288Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)
C1RComplement C1r; Belongs to the peptidase S1 family. (685 aa)
RCHY1Uncharacterized protein. (238 aa)
LRP8LDL receptor related protein 8. (842 aa)
LRP12LDL receptor related protein 12. (534 aa)
LRP1BUncharacterized protein. (1007 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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