STRINGSTRING
ASCL1 ASCL1 H3F3B H3F3B INHBA INHBA LOC102355712 LOC102355712 DNMT1 DNMT1 H3F3B-2 H3F3B-2 UHRF1 UHRF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ASCL1Achaete-scute family bHLH transcription factor 1. (198 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
INHBAInhibin subunit beta A. (390 aa)
LOC102355712Histone H3; Belongs to the histone H3 family. (129 aa)
DNMT1DNA methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1273 aa)
H3F3B-2Histone H3; Belongs to the histone H3 family. (136 aa)
UHRF1Ubiquitin like with PHD and ring finger domains 1. (819 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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