STRINGSTRING
LOC102352268 LOC102352268 MYD88 MYD88 LOC102365271 LOC102365271 PNLIPRP2 PNLIPRP2 LOC102353775 LOC102353775 ATG4B ATG4B CASP2 CASP2 CASP10 CASP10 LOC102347251 LOC102347251 TGFB3 TGFB3 LOC102345227 LOC102345227 H3B3Y4_LATCH H3B3Y4_LATCH ATG4D ATG4D STAT3 STAT3 ATG4C ATG4C TGFB2 TGFB2 ATG4A ATG4A CASP3 CASP3 LOC102356172 LOC102356172 LOC102363265 LOC102363265 CASP9 CASP9 TGFB1 TGFB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102352268Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
MYD88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (286 aa)
LOC102365271Alpha-amylase. (515 aa)
PNLIPRP2Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (479 aa)
LOC102353775Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (265 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (396 aa)
CASP2Caspase 2; Belongs to the peptidase C14A family. (433 aa)
CASP10Caspase 10; Belongs to the peptidase C14A family. (539 aa)
LOC102347251Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (190 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC102345227Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (259 aa)
H3B3Y4_LATCHUncharacterized protein; Belongs to the peptidase S1 family. (779 aa)
ATG4DCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (498 aa)
STAT3Signal transducer and activator of transcription. (763 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (456 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (385 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (290 aa)
LOC102356172Zmp:0000001088; Belongs to the peptidase S1 family. (259 aa)
LOC102363265Si:dkey-33m11.8; Belongs to the peptidase S1 family. (256 aa)
CASP9Caspase 9; Belongs to the peptidase C14A family. (457 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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