(5 nodes) (1997) Activities of superoxide dismutase and catalase in erythrocytes and transaminases in the plasma of carps (Cyprinus carpio L.) exposed to cadmium. network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102361787	Aminotran_1_2 domain-containing protein. (285 aa)
	GOT2	Aspartate aminotransferase. (392 aa)
	H2ZXP4_LATCH	Uncharacterized protein. (727 aa)
	SOD2	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (223 aa)
	GOT1L1	Glutamic-oxaloacetic transaminase 1 like 1. (405 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOT1L1	GOT2	ENSLACP00000023621	ENSLACP00000001398	Glutamic-oxaloacetic transaminase 1 like 1.	Aspartate aminotransferase.	0.970
GOT1L1	H2ZXP4_LATCH	ENSLACP00000023621	ENSLACP00000002165	Glutamic-oxaloacetic transaminase 1 like 1.	Uncharacterized protein.	0.981
GOT1L1	LOC102361787	ENSLACP00000023621	ENSLACP00000000449	Glutamic-oxaloacetic transaminase 1 like 1.	Aminotran_1_2 domain-containing protein.	0.981
GOT2	GOT1L1	ENSLACP00000001398	ENSLACP00000023621	Aspartate aminotransferase.	Glutamic-oxaloacetic transaminase 1 like 1.	0.970
GOT2	H2ZXP4_LATCH	ENSLACP00000001398	ENSLACP00000002165	Aspartate aminotransferase.	Uncharacterized protein.	0.986
GOT2	LOC102361787	ENSLACP00000001398	ENSLACP00000000449	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.986
H2ZXP4_LATCH	GOT1L1	ENSLACP00000002165	ENSLACP00000023621	Uncharacterized protein.	Glutamic-oxaloacetic transaminase 1 like 1.	0.981
H2ZXP4_LATCH	GOT2	ENSLACP00000002165	ENSLACP00000001398	Uncharacterized protein.	Aspartate aminotransferase.	0.986
H2ZXP4_LATCH	LOC102361787	ENSLACP00000002165	ENSLACP00000000449	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.901
LOC102361787	GOT1L1	ENSLACP00000000449	ENSLACP00000023621	Aminotran_1_2 domain-containing protein.	Glutamic-oxaloacetic transaminase 1 like 1.	0.981
LOC102361787	GOT2	ENSLACP00000000449	ENSLACP00000001398	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.986
LOC102361787	H2ZXP4_LATCH	ENSLACP00000000449	ENSLACP00000002165	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.901