(26 nodes) Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNH5	Potassium voltage-gated channel subfamily H member 5. (961 aa)
	ARNT2-2	Aryl-hydrocarbon receptor nuclear translocator 2. (430 aa)
	KCNH6	Potassium voltage-gated channel subfamily H member 6. (1204 aa)
	NPAS2	Neuronal PAS domain protein 2. (818 aa)
	SIM2	SIM bHLH transcription factor 2. (708 aa)
	CLOCK	Clock circadian regulator. (846 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (801 aa)
	H3B2A5_LATCH	PAS domain-containing protein. (690 aa)
	SIM1	SIM bHLH transcription factor 1. (460 aa)
	PASD1	Uncharacterized protein. (770 aa)
	LOC102354477	Uncharacterized protein. (838 aa)
	HIF1A	Hypoxia inducible factor 1 subunit alpha. (813 aa)
	NPAS3	Neuronal PAS domain protein 3. (668 aa)
	H3BH94_LATCH	PAS domain-containing protein. (733 aa)
	KCNH3	Uncharacterized protein. (911 aa)
	PER3	Period circadian regulator 3. (1317 aa)
	PER2	PAS domain-containing protein. (1371 aa)
	H2ZZF1_LATCH	PAS domain-containing protein. (1038 aa)
	EPAS1	Endothelial PAS domain protein 1. (861 aa)
	AHR	Aryl hydrocarbon receptor 1a. (868 aa)
	NPAS1	PAS domain-containing protein. (743 aa)
	LOC102353685	Potassium voltage-gated channel, subfamily H (eag-related), member 1b. (613 aa)
	PER1	Period circadian regulator 1. (1131 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (635 aa)
	KCNH8	Uncharacterized protein. (1032 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (553 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSLACP00000003128	ENSLACP00000015797	Aryl hydrocarbon receptor 1a.	Aryl hydrocarbon receptor nuclear translocator.	0.786
AHR	ARNT2-2	ENSLACP00000003128	ENSLACP00000011352	Aryl hydrocarbon receptor 1a.	Aryl-hydrocarbon receptor nuclear translocator 2.	0.917
AHR	ARNTL	ENSLACP00000003128	ENSLACP00000005211	Aryl hydrocarbon receptor 1a.	Aryl hydrocarbon receptor nuclear translocator like.	0.516
AHR	ARNTL2	ENSLACP00000003128	ENSLACP00000010964	Aryl hydrocarbon receptor 1a.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.516
AHR	CLOCK	ENSLACP00000003128	ENSLACP00000015264	Aryl hydrocarbon receptor 1a.	Clock circadian regulator.	0.516
AHR	NPAS2	ENSLACP00000003128	ENSLACP00000013444	Aryl hydrocarbon receptor 1a.	Neuronal PAS domain protein 2.	0.516
AHR	PASD1	ENSLACP00000003128	ENSLACP00000018464	Aryl hydrocarbon receptor 1a.	Uncharacterized protein.	0.516
ARNT	AHR	ENSLACP00000015797	ENSLACP00000003128	Aryl hydrocarbon receptor nuclear translocator.	Aryl hydrocarbon receptor 1a.	0.786
ARNT	EPAS1	ENSLACP00000015797	ENSLACP00000002905	Aryl hydrocarbon receptor nuclear translocator.	Endothelial PAS domain protein 1.	0.805
ARNT	H2ZZF1_LATCH	ENSLACP00000015797	ENSLACP00000002772	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.761
ARNT	H3B2A5_LATCH	ENSLACP00000015797	ENSLACP00000016026	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.802
ARNT	H3BH94_LATCH	ENSLACP00000015797	ENSLACP00000021265	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.761
ARNT	HIF1A	ENSLACP00000015797	ENSLACP00000020801	Aryl hydrocarbon receptor nuclear translocator.	Hypoxia inducible factor 1 subunit alpha.	0.802
ARNT	LOC102354477	ENSLACP00000015797	ENSLACP00000020262	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.805
ARNT	NPAS1	ENSLACP00000015797	ENSLACP00000004424	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.709
ARNT	NPAS3	ENSLACP00000015797	ENSLACP00000020815	Aryl hydrocarbon receptor nuclear translocator.	Neuronal PAS domain protein 3.	0.709
ARNT	PER1	ENSLACP00000015797	ENSLACP00000005084	Aryl hydrocarbon receptor nuclear translocator.	Period circadian regulator 1.	0.461
ARNT	PER2	ENSLACP00000015797	ENSLACP00000022930	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.461
ARNT	PER3	ENSLACP00000015797	ENSLACP00000022452	Aryl hydrocarbon receptor nuclear translocator.	Period circadian regulator 3.	0.461
ARNT	SIM1	ENSLACP00000015797	ENSLACP00000018073	Aryl hydrocarbon receptor nuclear translocator.	SIM bHLH transcription factor 1.	0.649